| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1005 |
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| Symbol | |
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| ID | 8879094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus ruber DSM 1279 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013946 |
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| Strand | + |
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| Start bp | 998408 |
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| End bp | 999487 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_003506790 |
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| Protein GI | 291295392 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.604587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.323448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTAT TGCCCAAGCT GCGTTTCGAC TTCGATGCCT ATCCGTACCT GACCCCAGAC
CTGCCGGGGG TGGACGGGGT GATTCGCCAC CGGCCCCAGG ATTTTCAGGT GGACGAGGTA
CCGGCCTACA GCCCGCTGGG CAGTGGGGAG CACCTTTTCG TGCGGATCGA GAAGGTGGGC
CTGACCACCC GGGCCGTTGT GGAGTTCCTG CGCGACCGCC TGCAGATTAG CGAGGCCCAG
ATCGGGGTGG CCGGTCTCAA GGACAAGCAC GCCCTGACCC GGCAGTGGTT CAGCATCCCG
GCCCGTTACG AGGCGCGCCT GGAGGGGCTG GCCGGGCTGG AGGGGGTGCG GGTGCTGGAA
CAGGCCCGGC ACCCGCACAA GCTCAAAGTG GGGCATCTGC GGGGCAACCG CTTCCGTATT
CTGATCCGCA GCGGGGATGG GGCCGGCTTA TCCCGGTTTC GAGCCGAGGC TATTTTGCGG
GTGCTCGAGC ACCAGGGGGT GCCCAACTAC TACGGCCCCC AGCGCTTTGG CATCGGAGGA
TTGAACCCGC TCAAGGGCTA TGAGCTGGTC AAGCAGGGTA AGGTGCACGC CCCCTCCTGG
CTAAAGAAAT TTCTGGTCTC GAGCCTGCAA AGCCTGCTCT TCAACGACTG GCTGGCCCTG
CGCCTGCAGA TGGGACTTTT TGGGCAGGTG ATCGAAGGGG ATGTAGCCAA AAAACACGAC
ACCGGCGGAG AGTTTGTGGT GCAGGACGCA GAAGCCGAGA ACCCTCGAGC CCTGCGCTTT
GAAATCAGCG CCACCGGGCC CCTCTACGGC AAAAAATACC GCGAGGCCCA GGGGCCGGCC
CGCGCCCTGG AAGACCAGGT ACTGCAGAAA TACGAGCTCG AGCGCGGCCA CTTCGCCTCG
CGCCGGGGGG ATCGCCGCCT GATCCGCTTT CCCCTTACCG AGTGGGGTGT GGAAGAAACC
GCGGAAGGGC TCTGGGTGAG CTTCTTTCTG CCCAAGGGGG CCTACGCTAC CGCCGTTTTG
CGCGAGGTGA TGAAGCGAAA CCCCGAGGAG GGGGAGCTGG AAGCCGAAAT GGAGGAGTAG
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| Protein sequence | MPVLPKLRFD FDAYPYLTPD LPGVDGVIRH RPQDFQVDEV PAYSPLGSGE HLFVRIEKVG
LTTRAVVEFL RDRLQISEAQ IGVAGLKDKH ALTRQWFSIP ARYEARLEGL AGLEGVRVLE
QARHPHKLKV GHLRGNRFRI LIRSGDGAGL SRFRAEAILR VLEHQGVPNY YGPQRFGIGG
LNPLKGYELV KQGKVHAPSW LKKFLVSSLQ SLLFNDWLAL RLQMGLFGQV IEGDVAKKHD
TGGEFVVQDA EAENPRALRF EISATGPLYG KKYREAQGPA RALEDQVLQK YELERGHFAS
RRGDRRLIRF PLTEWGVEET AEGLWVSFFL PKGAYATAVL REVMKRNPEE GELEAEMEE
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