Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0637 |
Symbol | |
ID | 8878715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 616559 |
End bp | 619327 |
Gene Length | 2769 bp |
Protein Length | 922 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Tetratricopeptide domain-containing protein |
Protein accession | YP_003506424 |
Protein GI | 291295026 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.694536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGTGAAG TGAGTACACT CTGGCAGGTT CACCTCGAGA CCCTTCGGCC TCATCTGAGT GGGCGCGACC ACCGCGGCAA AAAAGGCAGT TTACGCTGGC TGGAAGCCGC CGTGGCCGAG CGTGGTGGAA GGGCTGGAAC GGTACGCAAC ATTTTGTACA AAGATCTGGG TAGTCCCGAA GAAAAACTGC GGCTATTCGA GGTCATCTGC GATCTGTACA CCGAATCGGG GCTGGAGGCC CCTCCACTGC CCTCGGAGCT GGCCCTCGAG TCGGCCCGGC GGGCTTTGGG GCGCGACAAG CGCCGGCTGT TTCGCCGCTT TGTGCGGGCC CTGGAGCAGG GCGAAAAACC CCAGATGGTG GTGGTGGGGG GCGCGGCCAC CGGCAAGGGC GTGCTGCTGG CCGCAGTGGA GCGGGCCGTG CCGGGCTGCC TGATGGTCAA CCTGGGGGGT GAGCTGGCCC AGCACCTCCA CCCCCTGGCC GAAAAACTGG GGCTGGAGCT CGAGGGCATC CTCTCACAGC TCTCCCCCAC CCAGCCCTAC GCCCTGCAGG CCGCCCTGCA GGATGAGCTT CGCAACGAGC TGGCCGGTGC CCTCAACGCC TGCGGGAAAC CCCTGCTCTT GCGGGCCGAA AAAGAGGGGC AGATCGGCGG CCTGAGCCTG CGCGATACCC AGGGCAACCC GGTGGGGCTG GCGGCCTGGA TCGAGCCGCT GCTGCGCCGG CTCACCATTC CTTTTCTGGC CGGGCTCTCC GAACCCCCAC CCAACCTGGC CTGGCACCCG CTCTCGGCCC CCAGCCGGGC CGAGGCCCGC CGCTACGTGA AAGACCGCCT GCCCGATCTA CCGCCCGAGC GCGTAGAGGC CCTGGTCAAC CAGGCCGGGC GCAACTTTGC CGAGCTATCG CGGCTGGTGT TACTGGAGGC CGCCCAGACC CAGGACAGCC CCTCCGCCTA CAACCTGGCC CAGGACACCG CCCTGCGCCC CATCCTGTAC GCACTGGCCG TTCTATCGCC CGAGGCCGAC CCTGGCATCC CGGTTCCCCT GCTGGAAAAG GCCATCGGTA AAGGCCTCGA GCACCTCTCC CAGGCCGAGC GGGCACTGCT GGCCCCCATG GGCGAGGGCA AGGTACGCCC GGCCCTGCGC AGTCTGCTAC CCGAGGTACC AGAAAAAGAA GCCCGCCGGC TGCATACCCT GGCCCTGGAT TTTTTTAGGA GTGACCTGTT CCGTCAATTG CACCACGCGC GCGGCGCCCA GCGGCTGGAT AAGCTGCTCG AGCTGCTCTC ACAAGACCCC AGCCGGCTCG CGCTGCTGCC CACCCTCTGG GTTGAGTCAC AGTCCTGGCC CACCCTCGAG CGGGAAAGGC TGGCCATGGC GGTGGTGCGC TACCGGGCCG TGCTGGGCCA GTACGCCCAC CCCGAGGCCC TGGAGGCCCT CGAGCTGCTC TTTCACTCCA CCGACCCCGC GGTGCAGGCC TGGGCCCGGG TCAAGGCCGC CGAAGCCCGG GTAGACGCCG GCGATTTTCC CGCCGCCCTA CAGCTGCTGC CCTCGCCCGA GACCCTTTCG GGCGAGATTG GGGCCGAGGG GCTTCTGGTC TGGGCCGCTG TGGAACGCTG GCAGGGCGAC TACGCCCAGG CCGAAGCCTA CGTCCAGCAG GCCCTCTCCC TGCCCATTCA GCCCTTTCTG GCCGACCGGG TGCGGCTGTG GCAGGGCCTG GTAGCCAAGG ACGCGGGCCG TTTCGAGGAA GCCCTGGAAG CCCTGCGACA GGTCTCGCAC GACCCCCTCT TAGTCGGGCG GGCCCGCTAT CAGTCGGGCG ACCTGCTCCT GCGCACCGGG CGGGTCTACG AGGCCGAGGC CCAGATGCGC CAGGGTCTGC AAGCCCTGGA AGCCTCGGGG GCGCCCCCCG AGGAGATAGC CCGGGTACGG GCTCGCTTTG GTACAGCCCT GCGTCGCATC GGCAACTTCG AAGAAGCCGA GCGCTACCTG TACCAGTCCA TCCGCGAGGC CTCCGACGAG TTCATCCGAG CCCGGGCCAT GAGCGAGGCC AGCGTGCTCG AGCTGGCTCG AGGCCGCCCC CTGGAAGCCC TGGCCCTCCT GGCCGAGGCC GAGGCCTACC TGCGCGAGGT GCGCGAGCGC CCCGAGGAAG CCCACTACCG CCACCGCCGC ACCCTGTACC GCATTGCCGT GGCCTACTGG GTGCGAGCCA GCGGACTGCC TTACCTACCA CCTTATGTGG GCGGTCAAAA AGCCCCCGAA AGCCTGAAAA TCCTGCGCCA ACTGCGCGAA GAGCTGCTCA GCAAAAAACT CCCCGGCGAC CGCTACACTG CCTTGTCCAT CGATGTGGCC CTGAAACTCT CCCTGCTGAT GCCGGCCCCC AAGGCCGAGG CCATGATGCA GGGCTGCTTG CAGCAAAGCG ACCCCTATTT CCAGGCCCAG GCCCGCCTGG GCTACGCCGA AACCCTAGCA AGGCAGGAAA AGTGGGCCGA GGCGCTGGCC CAGGTGGTGC AGATTGGCGA TCTGCAAGAC CCAGGGGTGC AGAGCTGGAA GCTGGGCCTG GAGACCCAGG CGCTGCTGGG GCTGGGGCAG GAAGAGGCTG CCTGGAAAAA GCTCCAGACC TGTGCGGGCC TCCCGGCCCC CTACCGCGCC CAACTGGGCC GGGTGCTGGG CAAAATCTGG CCCGCCGAAG CCCTGCGCAC GCGGCTCAAA ACCCGGTCAC CCCTGGCCCT GGACGACTGC CTGGCCCTGC ACCTGAGCCA GGCCAGCCCC GCTCAGTAA
|
Protein sequence | MGEVSTLWQV HLETLRPHLS GRDHRGKKGS LRWLEAAVAE RGGRAGTVRN ILYKDLGSPE EKLRLFEVIC DLYTESGLEA PPLPSELALE SARRALGRDK RRLFRRFVRA LEQGEKPQMV VVGGAATGKG VLLAAVERAV PGCLMVNLGG ELAQHLHPLA EKLGLELEGI LSQLSPTQPY ALQAALQDEL RNELAGALNA CGKPLLLRAE KEGQIGGLSL RDTQGNPVGL AAWIEPLLRR LTIPFLAGLS EPPPNLAWHP LSAPSRAEAR RYVKDRLPDL PPERVEALVN QAGRNFAELS RLVLLEAAQT QDSPSAYNLA QDTALRPILY ALAVLSPEAD PGIPVPLLEK AIGKGLEHLS QAERALLAPM GEGKVRPALR SLLPEVPEKE ARRLHTLALD FFRSDLFRQL HHARGAQRLD KLLELLSQDP SRLALLPTLW VESQSWPTLE RERLAMAVVR YRAVLGQYAH PEALEALELL FHSTDPAVQA WARVKAAEAR VDAGDFPAAL QLLPSPETLS GEIGAEGLLV WAAVERWQGD YAQAEAYVQQ ALSLPIQPFL ADRVRLWQGL VAKDAGRFEE ALEALRQVSH DPLLVGRARY QSGDLLLRTG RVYEAEAQMR QGLQALEASG APPEEIARVR ARFGTALRRI GNFEEAERYL YQSIREASDE FIRARAMSEA SVLELARGRP LEALALLAEA EAYLREVRER PEEAHYRHRR TLYRIAVAYW VRASGLPYLP PYVGGQKAPE SLKILRQLRE ELLSKKLPGD RYTALSIDVA LKLSLLMPAP KAEAMMQGCL QQSDPYFQAQ ARLGYAETLA RQEKWAEALA QVVQIGDLQD PGVQSWKLGL ETQALLGLGQ EEAAWKKLQT CAGLPAPYRA QLGRVLGKIW PAEALRTRLK TRSPLALDDC LALHLSQASP AQ
|
| |