Gene Mrub_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0210 
Symbol 
ID8878277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp182638 
End bp184518 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content64% 
IMG OID 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_003506010 
Protein GI291294612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.987989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCC TGCCGTTCAA CTTATGGTTT ATCCTGCTGG CAGCTATCCT GATTGCCTGG 
GCTTTCAGCC TTACCTCGCA TCAGCAGCCC GCCAACCAGG TTGCCTATAC CACTTTTCTT
AACGAAATTG ACCAGGGCCG GGTGGCCAAA ATTACGGTTG ATGGACGGCA GCTCAACGTC
ACCCGCCGCG AGGACGGCGA TCAATACGTC ACCTTTGCGC CGGGCCCCAT AGACACCAGC
ACCATCCGCG AGTGGGGCGA CAAAAAAATC CAGGTGGATA TTGCCGCACC CAGACGAGAA
AATCCCTTGC TGGGATTCCT GATCCCTTTG CTGCTAATCG GTTTGCTGAT CGGGGTTTTC
TTCTTTTTCT CGCGCAACCG GGGCCCATCG GGCGACAACG CCTTTAGCTT CACCAAAAGC
CGGGCCAAGG TGCTGACCGA GGCGCCCAAA ACCAGCTTCA AAGACGTGGC CGGCTGCGAA
GAGGCCAAAG AGGAGCTCAA AGAGATCGTG GAGTTCCTCA AAGCCCCGGC CCGCTTTCAC
GAGATGGGGG CCCGCATTCC CAAGGGGGTG CTGCTGGTCG GGCCGCCCGG CTCGGGCAAA
ACCCATATCG CGCGGGCGGT GGCCGGTGAG GCCAAGGTGC CCTTTATCGC CGCCTCGGGC
TCCGACTTCG TGGAGATGTT CGTGGGGGTG GGGGCCGCCC GGGTGCGCGA CCTGTTCGAG
ACCGCCAAGC GCCACGCACC CTGCATCATC TTCATCGATG AAATTGACGC GGTGGGCCGC
CGGCGCGGGG GCGGCGTGGG CGGCGGCAAC GACGAGCGCG AGCAGACCCT CAACCAACTG
CTGGTGGAGC TCGACGGCTT TGAGAAAGAA ACCAGCATCA TCATTATGGC AGCCACCAAC
CGCCCGGACG TGCTCGACCC CGCGCTGCTG CGGCCGGGCC GCTTCGACCG CCAGGTGGCC
ATTGATGCCC CCGATGTGAA GGGGCGTGAG CAAATCCTCA AGATTCACGC CAAGGGCAAG
CCCCTGGCCG AAGATGTGGA TCTATCTTTG CTGGCCAGGC GCACCCCCGG CTTTGTGGGA
GCCGATCTGG AAAACCTCCT CAACGAGGCA GCCCTGCTGG CCGCCCGCGA TGGCCGCAAA
AAAATCACCA TGAAAGACCT GGAAGAAGCC GCCGACCGGG TGATGATGGG CCCCGCCAAA
AAGAGCATGG TGATCACGCC GAAAGACCGC GAGGTCACCG CCTACCACGA GGCCGGGCAC
GCGCTGGCCG CGCACTTCCT CGAGCACGCC GACAAGGTGC ACAAGGTGAC CATCGTCCCG
CGGGGACGGG CCATGGGCTT CATGATGCCC AGCCGCCAGG ACACCCTGCA CTGGAGCAAA
AAGCGCCTGA CCGACCAGAT CGCCGTGGCC CTGGCGGGCC GGGTGGCCGA GGAACTCATT
TTCGACGACG TGACCACCGG GGCCGAGAAC GACTTCCGCC AGGCCACCGA CCTGGCCCGC
CGCATGATTA CCGAGTGGGG GATGCACCCC GACTTTGGCA TGGTGGCCTA CCAGGTGCGC
GAGGACACCT ACCTGGGTGG CTACGACACC CGGCAGTACT CCGAGGACAC CGCCCGGCGC
ATTGACGAGG CCGTGCAAAA GCTGTTGCAG GAGCAGCACG ACCGGGTGCT GGGCCTGCTC
ACCGAAAAGA GGGAGGTGCT CGAGCGGGTC GCGCAGACGC TTCTGGAGCG TGAGACCCTG
AACGCCGAAG AGTTTGTGCG GGTGGTGGAA GGCGAGAAGC TGGAGCGCCT CGAGCCCACC
AGCGAAACCC CCAAGGACAA AGAGGAAAAG GAGCCCCCAC GGGTTGTCCC CAAGGTCAAA
CCCAACCTGG GCGGGGCCTG A
 
Protein sequence
MNRLPFNLWF ILLAAILIAW AFSLTSHQQP ANQVAYTTFL NEIDQGRVAK ITVDGRQLNV 
TRREDGDQYV TFAPGPIDTS TIREWGDKKI QVDIAAPRRE NPLLGFLIPL LLIGLLIGVF
FFFSRNRGPS GDNAFSFTKS RAKVLTEAPK TSFKDVAGCE EAKEELKEIV EFLKAPARFH
EMGARIPKGV LLVGPPGSGK THIARAVAGE AKVPFIAASG SDFVEMFVGV GAARVRDLFE
TAKRHAPCII FIDEIDAVGR RRGGGVGGGN DEREQTLNQL LVELDGFEKE TSIIIMAATN
RPDVLDPALL RPGRFDRQVA IDAPDVKGRE QILKIHAKGK PLAEDVDLSL LARRTPGFVG
ADLENLLNEA ALLAARDGRK KITMKDLEEA ADRVMMGPAK KSMVITPKDR EVTAYHEAGH
ALAAHFLEHA DKVHKVTIVP RGRAMGFMMP SRQDTLHWSK KRLTDQIAVA LAGRVAEELI
FDDVTTGAEN DFRQATDLAR RMITEWGMHP DFGMVAYQVR EDTYLGGYDT RQYSEDTARR
IDEAVQKLLQ EQHDRVLGLL TEKREVLERV AQTLLERETL NAEEFVRVVE GEKLERLEPT
SETPKDKEEK EPPRVVPKVK PNLGGA