Gene Mrub_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0175 
Symbol 
ID8878242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp155485 
End bp156288 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content66% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003505975 
Protein GI291294577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.319176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC AAGGCAAAGT GGTGGTGGTC ACGGGCGGTG GCAGCGGCAT GGGGCGGGCG 
CTGGTCTTGC GGCTGCTTAG CAAAGGGGCC CGGGTGGCGG CGGTGGATCT CAACGCGGCC
AGCCTGCAAG AAACCGCCCA ACTGGCCCAG GCCGCCGAGC GGCTCTCAAC CCACGTGCTC
AACATCACCC AGCGCGAGGC GGTGGAGGCC CTGCCTGCCG AGGTGATGGC CCGGCATGGG
GCGGTGGACG GCCTGATCAA CAACGCCGGC ATTATCCAGC CCTTTGTGCG GGTCAACGAC
CTGGATTACG GTGCCATCGA GCGGGTCATG AACGTCAACT TTTACGGCAC CCTGTACATG
ACCAAGGCCT TTTTGCCGCA CCTTTTGCAG CGCCCCGAGG CGCATATTGT GAACATCTCG
AGCATGGGTG GCTTCCTGCC GGTGCCGGGG CAGAGCGTGT ACGGGGCCTC CAAGGCAGCG
GTCAAGCTGC TGAGCGAGGG CCTGTTCGCC GAGCTGCTCG ACACCCCGGT GCGGGTGACG
GTGGTTTTTC CGGGGGCGGT GTCCACCAAC ATCACCGTCA ACTCGGGGGT GGCGATCCGG
GCCGCCGAGG GCCGCCAGCC GGCAGCCAGG CCCCTCGAGC CCGAGCGGGC TGCCCAGATT
ATCGTGGAGG GCATGGAACA GAACCGCTTC CGGGTGCTGG TGGGCTCGGA TGCCCGGCTG
ATGGACTTCC TCTACCGCCT GTCCCCCGAG CGGGCCGCCC GCTTTATCTA CCGGCAGATG
CGCTCACTCT TGGGGGCTTC CTGA
 
Protein sequence
MKVQGKVVVV TGGGSGMGRA LVLRLLSKGA RVAAVDLNAA SLQETAQLAQ AAERLSTHVL 
NITQREAVEA LPAEVMARHG AVDGLINNAG IIQPFVRVND LDYGAIERVM NVNFYGTLYM
TKAFLPHLLQ RPEAHIVNIS SMGGFLPVPG QSVYGASKAA VKLLSEGLFA ELLDTPVRVT
VVFPGAVSTN ITVNSGVAIR AAEGRQPAAR PLEPERAAQI IVEGMEQNRF RVLVGSDARL
MDFLYRLSPE RAARFIYRQM RSLLGAS