| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0140 |
|---|
| Symbol | |
|---|
| ID | 8878207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 117668 |
|---|
| End bp | 118486 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter-like protein |
|---|
| Protein accession | YP_003505940 |
|---|
| Protein GI | 291294542 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0377793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCCG AAGACCTTGG GAACATCCTG CTGGAAGTCA ACAACATTGA GGTGGTGTAC
AAGGACATCA TCCAGGTGCT GCGCGGGGTA TCGCTGAAGG TGCCCGAAGG GCAGATCACC
GCCTTGCTGG GCCCCAACGG AGCTGGGAAA ACCACCACCT TGCGGGCCAT CTCGGGGTTG
CTGGTGCCCG AGGACGGCAA GGTGGTCTCG GGCTCCATTC TGTACCGGGG TGAAAACATC
GCCAACAAGC CGCCCGAGCA GATTGTGCTG AAGGGCATTG TGCAGGTGCC GGAGGGGCGG
CGGGTGTTCA AGCACCTCAC CGTTGAGGAG AACCTGCGGG TGGGTGCGGT GACCCGGCGG
GATGGGGCCA AGGTAAGAGA GGATCTCGAG CGCATCTACC ACTACTTCCC CAAGCTGGCG
CTGATCAGAA CCCGCCTGGC TGGCTACTGC TCGGGGGGGG AGCAGCAGAT GCTGGCCATT
GGGCGGGCCC TGCTGGCCAA CCCCAAGCTC TTGCTGCTGG ACGAGCCAAG TTTGGGTCTG
GCCCCCCTGC TGGTACGGGA AATTTTTGAC ATTGTGGCCC AGATCAACGC CGAGGAGGGC
GTGACGGTGT TGGTGGTGGA ACAAAACGCT CGAGTAGCCC TTTCGGTGGC CCATTATGGC
TACATCATGG AGTCGGGCCG GATTGCCCTC GAGGGCACCA GGGAATACCT GGAAACCAAC
CCTGATGTAA AGGAGTTCTA CTTGGGTGTA GCCAAGTCGG GCGGGCGCAA GAGCTTCAAG
GACGTCAAAA GCTACCGCCG GCGCAAGCGC TTTATGTGA
|
|---|
| Protein sequence | MRPEDLGNIL LEVNNIEVVY KDIIQVLRGV SLKVPEGQIT ALLGPNGAGK TTTLRAISGL
LVPEDGKVVS GSILYRGENI ANKPPEQIVL KGIVQVPEGR RVFKHLTVEE NLRVGAVTRR
DGAKVREDLE RIYHYFPKLA LIRTRLAGYC SGGEQQMLAI GRALLANPKL LLLDEPSLGL
APLLVREIFD IVAQINAEEG VTVLVVEQNA RVALSVAHYG YIMESGRIAL EGTREYLETN
PDVKEFYLGV AKSGGRKSFK DVKSYRRRKR FM
|
|---|
| |