| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_6322 |
|---|
| Symbol | |
|---|
| ID | 6141892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010509 |
|---|
| Strand | + |
|---|
| Start bp | 19214 |
|---|
| End bp | 21580 |
|---|
| Gene Length | 2367 bp |
|---|
| Protein Length | 788 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641639801 |
|---|
| Product | DNA topoisomerase I |
|---|
| Protein accession | YP_001766487 |
|---|
| Protein GI | 170745029 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0550] Topoisomerase IA |
|---|
| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA TGGTGGTGGA GAGTCCGAAT AAGGTTGCGA GTATCCAAGG TTATCTCGGC
GACGATTGGA AGGTGGTCGC AAGCTCCGGT CATATTCGCG ACTTGCCGCA ACGCGAATTT
GGCATCAGCA AGCCCGATTT TTCCCTTCAG TACGAATATA TCCCGCCGCA GAAAGTGGGA
AATAAGACTT TCCCCGGCGC CGCCGATCGC GTGGCACGGA TTAAACGCGA GGTCGCGAAA
GCCGATGCGG TCTACCTGGC GACTGATCCG GACCGCGAGG GCGAAGCGAT TTCCTGGCAT
CTGAAGGAGG CGCTTCAACT CGGCGAAGAC GACTATGAGC GTGTGACGTT CACCGAGATT
ACGCCGAAGG CGATCCAGGC AGCGCTGCGC GCCGCACGGC GCATCGACAT GGACCTGGTG
CATGCCCAGG AAGGGCGGCG CGCCCTGGAT CGGTTCGTGG GCTACATGGT GTCGCCGCTG
CTGTCGGACA TGCTCGGCAT GAACCTGTCC GCCGGCCGCG TTCAGAGCGT GGCGGTGCGC
CTGGTGGTGG ACCTGGAGCG CCGTATCGCG GCGTTCAAAT CCACCAAGCA TTTCAGCGCG
GTGGTGACGT TCGACGCCGG CGCCGGCGCG AAATGGTCGG CGCAGTGGGA CACGAAGCCG
TATGTGACCG AGGACAGCCC TTATGTGCTG GACGAGGCAT TGGCCGCGAA GGCCTCGCAA
TCGCGGCAAT TCGTGGTCCT GGAGTCGAAG ACGGAAGAGA AGTCGGAACG GCCGCCGTCG
CCGCTTTCGA CGCTCGGGAT GCTGCGCGCG GCTAGCACGG CCTTGAAAAT GAGTTCTGCC
GCGACGACGA AGGCGGCGCA GAAGCTCTTT GAGGACGGCC ATATCACGTA CATCCGCACC
GACAGCGTGA ACCTGAGTCC GGATGCGGCC GACAAGGTGC GTAGCTTCGC GGCAAGCCAG
GGGATGGCGT TGTCGCCAGA AGTGCGCAGG TGGAAGGAGA AAGCCAGCGC GCAGGGCGGA
CACGCCGACG CGGTGCGGCC GACGCACATT GAGGTCGAGG ACGCCGGCGC GGACGACGCC
CAGCGAGCGC TCTATCGGTT GATCCGGCTG CGCACCCTGG TGTCGCAGAT GGCCGACGCC
CGATACACGG TCAATACGGT GCGCCTGCGC GCTACCGATC GCGACGGCTT TGAGTATGTC
GCGCGCGGCC GCAAGATGAT CGACGCCGGC TGGCGTGCGC TGCTGGAGCG CGATCCGGAC
GAGGAAGAGA ACAGCGACGA CGACGCCGCC AAGGACGGCC AGGTTCCACG CCTGGCTGTC
GGCGGTGATC TGCGTGCGAT CGACGGCAAG GTGTTGGACA AGAAGACGGA GCCGCCGCGC
CGTTTCACTG AAGCAACTTT GCTTCAGAAG CTTGAGGACG AAGGAGTCGG CCGCCCTGCG
ACGTTCGCGG CGATCATGAC CAACGTGCTG GGCCGCAGCT ACGTCGAGCT GGACAAGAAG
CGATGCCTAC TGCCGACCGA GATCGGCGAG CTGGTGGTGG ACAATCTGCT GCGCGGCCAG
TTCGGTTTCA TGGAGCTGGG CTTCACCCGC GAGCTTGAGG TGCAGCTAGA CGCCATCGCC
GAAGGCAAGG CGTCGTATCG CGACGTGGTG GAACCGGCCT ACAGGCAGTT GAACGAGGAG
CTGGCGCGCA TCGCGGTCAG CGGCGAGTTC ACGCCCCGCT TCAAATGCCC GAAATGCGGC
ACGGGCATGC GTCGCTACGC CAAACCCGGC AAGTCGCCGT TCTGGCGCTG CACGGCCGAG
GCCGAGACGT GCGGCCACTA CATGGACGAC GACAAGGGCA AGCCGGTCGA GCGAACGGCG
CACCCGTGCC CTCGCTGTGG TGAGACCCTA CGGCGCTTCA AGCGCAAGAA TGGCGGCGGC
CTGGTGTGGG TCTGCCCGGC CGAGGCCTGC GAGACGTTCC TGGACGACGT GGGCGGCAAG
CCCGTCGCCC TGCACACCTG CACCAAGTGC AACGCGCCGC TGCGGCGATA CCAGAAGAAG
GATCGCGAGA CCGGGAAGCC GACAGGCGCA TTTGGCTGGT TCTGCACGGA CACCGAGAAC
TGCAAGACCT TCATGGACGA CGACAAGGGC CGGCCCGTCG CGATCAAGAC GGCACCGTGC
CCGAAGTGCG GCAAGGCCAT GTACCGTCGC AAGGGCGACC ATGGCTTTTG GTGGGGCTGT
AGCGGCTACC GTGAGGGCTG CAAGACCATC ATGGACGACG ACAAGGGCAA GCCCGTGCCG
AGGGCGGCAA AGGGCGCCAC CAGGTCCAGC AACTCGCCGG CGAAGGCCAA AGCGAAGCCT
GCGGCTAAGC CGAAGATGCG CCGGTAG
|
|---|
| Protein sequence | MKLMVVESPN KVASIQGYLG DDWKVVASSG HIRDLPQREF GISKPDFSLQ YEYIPPQKVG
NKTFPGAADR VARIKREVAK ADAVYLATDP DREGEAISWH LKEALQLGED DYERVTFTEI
TPKAIQAALR AARRIDMDLV HAQEGRRALD RFVGYMVSPL LSDMLGMNLS AGRVQSVAVR
LVVDLERRIA AFKSTKHFSA VVTFDAGAGA KWSAQWDTKP YVTEDSPYVL DEALAAKASQ
SRQFVVLESK TEEKSERPPS PLSTLGMLRA ASTALKMSSA ATTKAAQKLF EDGHITYIRT
DSVNLSPDAA DKVRSFAASQ GMALSPEVRR WKEKASAQGG HADAVRPTHI EVEDAGADDA
QRALYRLIRL RTLVSQMADA RYTVNTVRLR ATDRDGFEYV ARGRKMIDAG WRALLERDPD
EEENSDDDAA KDGQVPRLAV GGDLRAIDGK VLDKKTEPPR RFTEATLLQK LEDEGVGRPA
TFAAIMTNVL GRSYVELDKK RCLLPTEIGE LVVDNLLRGQ FGFMELGFTR ELEVQLDAIA
EGKASYRDVV EPAYRQLNEE LARIAVSGEF TPRFKCPKCG TGMRRYAKPG KSPFWRCTAE
AETCGHYMDD DKGKPVERTA HPCPRCGETL RRFKRKNGGG LVWVCPAEAC ETFLDDVGGK
PVALHTCTKC NAPLRRYQKK DRETGKPTGA FGWFCTDTEN CKTFMDDDKG RPVAIKTAPC
PKCGKAMYRR KGDHGFWWGC SGYREGCKTI MDDDKGKPVP RAAKGATRSS NSPAKAKAKP
AAKPKMRR
|
|---|
| |