Gene Mrad2831_5845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5845 
Symbol 
ID6142015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010510 
Strand
Start bp83936 
End bp85435 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content66% 
IMG OID641639900 
Productpermease for cytosine/purines uracil thiamine allantoin 
Protein accessionYP_001766586 
Protein GI170745129 
COG category[F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1953] Cytosine/uracil/thiamine/allantoin permeases 
TIGRFAM ID[TIGR00800] NCS1 nucleoside transporter family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000149577 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACGCAC AGGTCGAGGC CGCCGGCATC AGCACCGCCG TGTCGGATGA ACGGGACGCC 
GTCGTCATCA AGCCGAGCTA CGATCCGGAT CTCGTGAACA AGGATCTGGC GCCGCTGCGC
AAGCAGACCT GGGGCACCTA CAACATCTTC GCCTTCTGGA TGTCTGACGT TCACAGCGTC
GGCGGATACG TGACCGCCGG CTCCCTGTTC TCGCTGGGAC TCGTGAGCTG GCAGGTGCTG
ATCGCCCTGC TGGTCGGCAT CGTCATCGTC CAGGTCTTCT GCAACCTCGT CGCCAAACCC
AGCCAGCGGA CCGGCACGCC TTATCCGGTG ATCTGCCGCG CCTCCTTCGG CGTGAAGGGC
GCCAACATCC CGGCGATCAT CCGCGGGCTG ATCGCGGTGG CGTGGTACGG CATTCAGACC
TACCTCGCCT CGGCGGCGCT GACCGTGGTG GCGCTACGCT TCTTCCCCGA ACTCGCCGTC
TACGCCGACC TCAAGCAGCA CGGCTTCGCC GGCCTGTCGA GCCTGGGCTG GGCCGCCTTC
ATGACCCTCT GGGTCCTGCA GGCTCTGGTC TTCTGGCGCG GCATGGAGGC GATCCGCGTG
TTCATCGACT GGGCGGGACC GGCGGTCTAC GTGGTGATGA TCGCGCTCGC CGCGTACCTC
GTCGCCAAGG CCGGGCTCGG CGAGATCGGG CTGACCCTGG GCACCGTGAA GTACACCGGC
TGGGACGCCC TGCCGGTGAT GATCAACGCC GTCGCCCTCG TGGTCTCCTA CTTCTCCGGG
CCGATGCTGA ACTTCGGCGA CTTCTCGCGC TACGGCGAGA GCTTCGACGC GGTGAAGAGG
GGCAACTTCT GGGGCCTCCC GGTGAACTTC CTCGGATTCT CGCTCCTGAC GGTCGTCACC
GCCTCGGCGA CGGTGCCGGT CTTCGGTCAC CTGATCACCG ACCCGGTGGA GACGGTGAGC
CGCATCGACA GCACCTTCGC GGTCGTGCTC GGCGCCTTCA CCTTCATGAC GGCGACCATC
GGGATCAACA TCGTCGCGAA CTTCGTCTCG CCCGCGTTCG ACTTCTCGAA CGTGTCGCCG
CGGCGGATCT CGTGGCGGAT GGGCGGGATG ATCGCGGCCG TCGGCTCGAT CTTCATCACG
CCCTGGAACC TCTACAACAA TCCCGCCGTG ATCCACTACA CGCTCGACGT CCTCGGCGCT
TTCATCGGCC CGCTGTTCGG GATCCTGATC GCCGATTTCT ACGTCGTGAA GAAGGAGAAG
GTCGTCCTCG ACGACCTCTA CACGATGAGC CCCGCCGGGA CGTACTGGTA CACGGACGGG
TACAACCGCG CCGCCGTGGC CGCCCTGATC CCCTCGGCCC TGATCCCCGC GCTCTGCGTG
ATCCTGCCGG GCCTGGAGAG CGTGGCGAAC TTCACGTGGT TCATCGGCTG CGCTCTGGGC
TTCGCGATCT ACACGGCCCT CATGCGCCGC CGCCCCGCCG GCGCGGTCCG TCCGGCCTGA
 
Protein sequence
MYAQVEAAGI STAVSDERDA VVIKPSYDPD LVNKDLAPLR KQTWGTYNIF AFWMSDVHSV 
GGYVTAGSLF SLGLVSWQVL IALLVGIVIV QVFCNLVAKP SQRTGTPYPV ICRASFGVKG
ANIPAIIRGL IAVAWYGIQT YLASAALTVV ALRFFPELAV YADLKQHGFA GLSSLGWAAF
MTLWVLQALV FWRGMEAIRV FIDWAGPAVY VVMIALAAYL VAKAGLGEIG LTLGTVKYTG
WDALPVMINA VALVVSYFSG PMLNFGDFSR YGESFDAVKR GNFWGLPVNF LGFSLLTVVT
ASATVPVFGH LITDPVETVS RIDSTFAVVL GAFTFMTATI GINIVANFVS PAFDFSNVSP
RRISWRMGGM IAAVGSIFIT PWNLYNNPAV IHYTLDVLGA FIGPLFGILI ADFYVVKKEK
VVLDDLYTMS PAGTYWYTDG YNRAAVAALI PSALIPALCV ILPGLESVAN FTWFIGCALG
FAIYTALMRR RPAGAVRPA