| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5426 |
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| Symbol | |
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| ID | 6141499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 5729843 |
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| End bp | 5731840 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641631128 |
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| Product | squalene-hopene cyclase |
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| Protein accession | YP_001758056 |
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| Protein GI | 170751796 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.115228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGAGG CCGTAAGCAA AGTCGAGGCG CTGCAGCGCT CCAAGACTCA GGGGATCTCG
CTCGAGGACG TCGAGCGCGG CGTGGCGCAG GCGACGCGCG CGCTGACCGC CCTGGCGCAC
GACGACGGGC ACATCTGCTT CGAGCTCGAG GCGGATGCCA CGATCCCGTC CGAGTACATC
CTGTTCCACC ATTTCCGCGG CACGCAGGTC CCCGGCGACC TCGAGGCCAA GATCGGCAAC
TACCTCCGCC GCACCCAGGG GCGGCACGGC GGATGGGCCC TCGTCCACGA GGGGCCGTTC
GACATGAGCT GCACGGTCAA GGCGTACTTC GCCCTCAAGA TGATCGGCGA CGATATCGAG
GCGCCGCACA TGCGCCGGGC GCGCGAGGGC ATCCTGTCCC GCGGCGGCGC GGCCAACGCC
AACGTGTTCA CCCGCTTCAT GCTGGCGCTC TACGGCGAGG TGCCGTGGCG CGCCGTGCCG
GTGATGCCCG TCGAGGTGAT GTTCCTGCCG AAGTGGTTCC CGTTCCACCT CGACAAGATC
AGCTACTGGG CCCGCACCAC CGTGGTGCCG CTGTTCGTGC TCCAGGCGAC CAAGCCCCGG
GCGCGCAACC CGCGCGGCAT CAGCGTGCAG GAGCTGTTCG TCACGCCGCC GGAGAGCGTC
CGCTCCTGGC CGGGCTCCCC CCACGCCACG TGGCCGTGGA CGCCGATCTT CGGCTTCATC
GACCGGGTGC TGCAGCGGGT CGAGAATCAC CTGCCGCGCA AGAGCCGGCA GCGCGCCATG
GAGATGGCCC GCGCCTGGGT GAGCGAGCGC CTCAACGGCG AGGACGGCCT GGGCGCTATC
TTCCCCGCGA TGGTCAACTC GGTGCTGATG TACGAGGTGA TGGGCTACCG GCCCGATCAC
CCGCAGGTGC GCGTCGCCTG CGACGCGATC GAGAAGCTCG TGGTCGAGAA GGCCGACGAG
GCCTACGTCC AGCCCTGCGT CTCGCCGGTC TGGGACACGG CGCTCGCGAG CCACGCGCTG
CTCGAGGCGG GCGGCCCCGA GGCCGAGGCC CAGGCCCGCG CCGGTCTGGA CTGGCTGAAG
CCCCGCCAGG TGCTCGACAT CGTCGGTGAC TGGGCGGCGC GCAAGCCGAA GGTCCGGCCG
GGCGGCTGGG CGTTCCAGTA CGCCAACGCG CACTATCCCG ACCTCGACGA CACCGCCGTG
GTGGTGATGG CGATGGACCG GGCCATGCAC CAGCACGGCC TCGTCGCCGG CATGCCGGAC
TACAAGGCCT CGATCGCCCG CGCCCGCGAG TGGGTCGAGG GGCTGCAGTC GGAGGACGGT
GGCTGGGCGG CGTTCGACGC CGACAACAAC CACATGTACC TCAACCACAT CCCGTTCTCG
GATCACGGCG CGCTGCTCGA TCCGCCGACC GCGGACGTGA CCGCCCGCGT GGTCGGGATG
CTGTCCCAGC TCGGCGAGAC CCGGGAGACC TCCCGCGCCC TCGACCGCGG CGTGAACTAC
CTCCTGAACG ACCAGGAGGA GGACGGCTCG TGGTACGGCC GCTGGGGCAT GAACTTCATC
TACGGCACGT GGTCGGTGCT CTGCGCCCTC AACGCCGCCG GGGTGGACCC GGCCGATCCG
CGCATCCAGA AGGCCGTGTC CTGGCTGATC CGGATCCAGA ACCCGGATGG CGGCTGGGGC
GAGGACGCCT CCTCGTACAA GATCGACCCG GCCTTCGAGC CCGGCTCGTC CACCGCTTCG
CAGACCGCCT GGGCGCTGCT CGCCCTAATG GCGGCCGGCG CGGTCGATGA CCCGGCCGTG
ACCCGGGGCA TCAACTTCCT GACCCGCACG CAGGGCGCGG ACGGATTCTG GAAGGAGGAG
CGCTACACCG CCACGGGCTT CCCGCGGGTG TTCTACCTGC GGTACCATGG CTACCCGAAG
TTCTTCCCGC TCTGGGCGAT GGCGCGCTTC CGCAACCTCA AGCGTGGCAA CAGCCGGCGC
GTCCAGTTCG GCATGTGA
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| Protein sequence | MREAVSKVEA LQRSKTQGIS LEDVERGVAQ ATRALTALAH DDGHICFELE ADATIPSEYI
LFHHFRGTQV PGDLEAKIGN YLRRTQGRHG GWALVHEGPF DMSCTVKAYF ALKMIGDDIE
APHMRRAREG ILSRGGAANA NVFTRFMLAL YGEVPWRAVP VMPVEVMFLP KWFPFHLDKI
SYWARTTVVP LFVLQATKPR ARNPRGISVQ ELFVTPPESV RSWPGSPHAT WPWTPIFGFI
DRVLQRVENH LPRKSRQRAM EMARAWVSER LNGEDGLGAI FPAMVNSVLM YEVMGYRPDH
PQVRVACDAI EKLVVEKADE AYVQPCVSPV WDTALASHAL LEAGGPEAEA QARAGLDWLK
PRQVLDIVGD WAARKPKVRP GGWAFQYANA HYPDLDDTAV VVMAMDRAMH QHGLVAGMPD
YKASIARARE WVEGLQSEDG GWAAFDADNN HMYLNHIPFS DHGALLDPPT ADVTARVVGM
LSQLGETRET SRALDRGVNY LLNDQEEDGS WYGRWGMNFI YGTWSVLCAL NAAGVDPADP
RIQKAVSWLI RIQNPDGGWG EDASSYKIDP AFEPGSSTAS QTAWALLALM AAGAVDDPAV
TRGINFLTRT QGADGFWKEE RYTATGFPRV FYLRYHGYPK FFPLWAMARF RNLKRGNSRR
VQFGM
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