| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5347 |
|---|
| Symbol | |
|---|
| ID | 6141419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 5654510 |
|---|
| End bp | 5655529 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641631048 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_001757977 |
|---|
| Protein GI | 170751717 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.960617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTCT CCATCGAGAA TCCGAAGCCC GAGGCGGAGG CGGGGCTCAA CGACCTCGTC
GCGCTGGTGG CCGACGGCAT GGCGCGGGTC AACACCACGA TCCTGTCGCG GACGGGATCG
GACGTGGCGA TGATCCCCGA GGTCGCCAAC CACCTGATCG CCTCCGGCGG CAAGCGCCTG
CGGCCGATCC TGACGCTGGC CTGCGCGCAG CTCTGCGGCT ACGCGGGCGC CACCGAAGGC
GACGTCAAGC TCGCCGCCAG CGTCGAGTTC ATGCACACCG CCACGCTCCT CCACGACGAC
GTGGTCGACG AGAGCGACAT GCGCCGCGGC CGCGTCGCCG CCCGGATCAA GTGGGGCAAC
GAGGCCTCCG TGCTCGTCGG CGACTTCCTG CTCGGCCAAG CCTTCCGGAT GATGGTCGAG
GTCGGCTCGC TGCGGGCGCT CGACATCCTC TCGGCCGCCG CCACGGTGAT CGCCGAGGGC
GAGGTGATGC AGCTCACCAA CGCCAAGAAC CTGGAGACCG ACGAGGCCGC CTATCTGGCG
GTGATCCGCG GCAAGACCGC CGAGCTGTTC GCCGCCGCCT GCGAGGTCGG GCCGGTGCTC
GCCGGGCGAC CCGAGGCCGA GCAGGCGGCG GCCCGATCCT ACGGGATGAA TCTCGGCATC
GCCTTCCAGC TGATCGACGA CGTGCTCGAT TACGGCGGCA CCTCGGCCGA GCTCGGCAAG
AACGTCGGCG ACGATTTCCG CGAGGGCAAG ATCACCCTGC CGATCGTCCT GGCCTATCGC
CGGGCCAGCG AGGGCGAGCG CGGCTTCTGG CGGCGCACCC TGCAGCAGGG CGAGATCGGC
GAGACCGACC TGGAGACCGC CCTCGACCTC CTACAGCGCC ACGGTGCCCT GGAGGAGACT
GTGGCCCGCG CCCACCATTA CGGCGCCGAG GCCCGGGCCG CCCTCGACAT CTTCCCGGAC
GGGCCCGTCA AGGCGGCGCT GATCGGGGCC GTTGAGTTCT GCGTGGCGCG GGCGCGCTGA
|
|---|
| Protein sequence | MALSIENPKP EAEAGLNDLV ALVADGMARV NTTILSRTGS DVAMIPEVAN HLIASGGKRL
RPILTLACAQ LCGYAGATEG DVKLAASVEF MHTATLLHDD VVDESDMRRG RVAARIKWGN
EASVLVGDFL LGQAFRMMVE VGSLRALDIL SAAATVIAEG EVMQLTNAKN LETDEAAYLA
VIRGKTAELF AAACEVGPVL AGRPEAEQAA ARSYGMNLGI AFQLIDDVLD YGGTSAELGK
NVGDDFREGK ITLPIVLAYR RASEGERGFW RRTLQQGEIG ETDLETALDL LQRHGALEET
VARAHHYGAE ARAALDIFPD GPVKAALIGA VEFCVARAR
|
|---|
| |