Gene Mrad2831_5000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5000 
Symbol 
ID6141068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5322717 
End bp5323379 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID641630708 
Product3-oxoacid CoA-transferase, B subunit 
Protein accessionYP_001757641 
Protein GI170751381 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.54991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00178091 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCTGGA CCCGCGAGCA GATGGCGGCG CGCGCCGCCA AGGAGCTGGA GGACGGCTTC 
TACGTGAACC TCGGCATCGG CATCCCGACG CTGGTGTCGA ACTACATCCC CGAGGGCATG
TCGGTGCAGC TCCAGTCGGA GAACGGCATG CTGGGCATGG GCCCCTTCCC GTACGAGGGC
GAGGAGGACC CGGACCTGAT CAACGCCGGC AAGCAGACGA TCACGGCGCT GCCGACGACC
AGCTACTTCT CCTCGGCCGA TTCCTTCGGG ATGATCCGCG GCGGGCACAT CAACCTGTCG
ATCCTCGGCG CCATGCAGGT GGCCGGCAAC GGCGACCTCG CGAACTGGAT GATCCCCGGC
AAGATGGTGA AGGGGATGGG CGGCGCCATG GACCTCGTGG CGGGCGTGAA GCGCGTCGTC
GTGGTGATGG AGCACGTTGC CAAGAACAAG GACGGCACCG AGAGCCCGAA GCTGCTCAAG
GCCTGCGACC TGCCGCTGAC CGGCACCCGC GTGGTCGACT TGGTGATCAC CGATCTCGGC
GTGTTCGAGA TCGACAAGAA GGGCGACGGT GGCATGAGGC TGATCGAGCT CGCCGACGGC
GTCACCGAGG ACGAGATCCG CGGGAAGACC GAGGCCGACT TCACGGTCGT CCTGAAGAAC
TGA
 
Protein sequence
MAWTREQMAA RAAKELEDGF YVNLGIGIPT LVSNYIPEGM SVQLQSENGM LGMGPFPYEG 
EEDPDLINAG KQTITALPTT SYFSSADSFG MIRGGHINLS ILGAMQVAGN GDLANWMIPG
KMVKGMGGAM DLVAGVKRVV VVMEHVAKNK DGTESPKLLK ACDLPLTGTR VVDLVITDLG
VFEIDKKGDG GMRLIELADG VTEDEIRGKT EADFTVVLKN