| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4993 |
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| Symbol | |
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| ID | 6141061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 5313667 |
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| End bp | 5315667 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641630701 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_001757634 |
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| Protein GI | 170751374 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000108903 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGTCG AGACCGGCCA CTTCGCCCTC GCGCTCGCGC TGGCGATCTC CCTCGTCCAG
GTGGTGATGC CGATCTGGGC CGCCCGCTCG GGCGATCCGG CGCTCCGCCA GATCGCCTCG
CAGGCGGCGC TCGGCGCGTT CGCCTGCGTG CTGTTCGCCT TCGCGGCGCT GACCTACGCG
CACGTCACCT CGGACTTCTC GGTCCAGAAC GTCGTCGAGA ACTCGCACAC GCAGAAGCCG
CTGATCTACA AGATCTCGGG CGTCTGGGGG AACCACGAGG GCTCGATGCT CCTCTGGGTG
CTGATCCTCA CCCTGTTCGG CGCCTGCGTG GCGGCCGCGA AGAACTCGGT GCCGCCGCGG
CTGCGGGCCA GCACGCTCGG CGTGCAGGGG CTGATCACCT TCGTGTTCGT GCTGTTCATC
ATCACGACCT CGAACCCGTT CACCCGGGTG ATCCCGGCGC CGCTCGAGGG CAACGACCTC
AACCCGCTGT TGCAGGATCC CGGTCTCGCG ATCCACCCGC CGCTCCTCTA CGTCGGCTAT
GTCGGCTTCT CGATCAGCTT CGCCTTCGCG GTGGCCGCGC TGATCGACGG GCGGATCGAC
GCCGTCTGGG CGCGGGCGGT GCGGCCCTGG ACGCTGGCCG CGTGGTGCTT CCTGACGCTC
GGGATCGCGA TGGGTTCCTA CTGGGCCTAT TACGAGCTCG GCTGGGGCGG CTGGTGGTTC
TGGGATCCGG TGGAGAACGC CTCGCTGATG CCGTGGATCG CCGGCACGGC GCTGCTGCAC
TCCACCGTGG TGATGGAGAA GCGCGACGCC CTGAAGGTCT GGACGGTGCT GCTCGCCATC
CTGACCTTCT CGCTCTCGCT GATCGGCACC TTCCTGGTCC GCTCGGGCGT GATCACCTCG
GTCCATTCCT TCGCCACGGA CCCGACCCGC GGCGTCTTCA TCCTGGCGAT CCTGGTGCTG
TTCATCGGCG GCTCGCTGAC GCTGTTCGCG TGGCGGGCGC CGCTGCTGCG GCAGGGCGGC
CTGTTCGCGC CGATCTCTCG CGAGGGGTCG CTCGTCCTGA ACAACCTGTT CCTGGTGGCG
GCCTGCGCCA CCGTGCTGGT CGGCACCCTG TACCCGCTCG TGCTGGAGAT GCTGACGGGC
GAGAAGATCA CGGTCGGGCC GCCCTTCTTC AACTCCACCT TCGTCCCGCT GGCGATCCCG
CTCCTGCTGA TCGTCCCCAT GGGGCAGTCG CTCGCCTGGA AGCGCGGCGA CGTGCTCGCC
GCCGCCCAGC GCCTGTTCGC CGCGCTGGCG GTCGCCCTGG TCGTCGGCTT CGGGGTGCTG
GCGCTGACCT GGGGCGGGCC GGTCATGGCG CCGGTCGGGA TCGGCCTCGG CGCCTACCTG
CTGATCGGCT CCGCCCTGGA GATCGTCACC CGCGCCCGGG GCTACGGGGC GAGCCGCGCC
CGCTCCCTCG GCCAGATCGG CCGCCGCGCC GTCGGCCTGC CGCGCTCGGC CTGGGGCACC
GCCATCGCTC ATGCCGGGGT CGGCGTCGTG GTGCTGGGCA TCGCCGCGCA GGGCTGGGCG
ACCGAGGGGC TGGCGACCCT CAAGGCCGGC CAGAGCCTGG CGACGGGACC CTACGTGGCG
ACCCTCGATC GCGTCGCGCC GCGCAAGGGA CCGAACTACG AGGAGGCCGC CGCCTACCTG
ACCATCCGCA CCCGCGGCGG CGACGAGGTC GGGCAGGTCG AGACCGGCAA GCGGTTCTAC
CCGAGCCGCA AGATGGCGGT GACGGAATCG GGCCTGCTGA CCGTCGGCGC CAGCCAGGTC
TACGCGAGTC TCGGGGAGAT CGGGCAGGAC GGCGGCGTCG GCCTGCGCCT CTACTACAAG
CCGCTGGTCC TGCTGATCTG GCTCGGGGCG GTGGTGATGG CCGTGGGCGG CGGCCTGTCG
CTCACGGACC GGCGGATGCG CGTAGGCGTC CCCGCCAAGG CGAAGGCGCG GCCGCTCCCG
GTCGCGGTGC CGGCCGAGTG A
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| Protein sequence | MIVETGHFAL ALALAISLVQ VVMPIWAARS GDPALRQIAS QAALGAFACV LFAFAALTYA
HVTSDFSVQN VVENSHTQKP LIYKISGVWG NHEGSMLLWV LILTLFGACV AAAKNSVPPR
LRASTLGVQG LITFVFVLFI ITTSNPFTRV IPAPLEGNDL NPLLQDPGLA IHPPLLYVGY
VGFSISFAFA VAALIDGRID AVWARAVRPW TLAAWCFLTL GIAMGSYWAY YELGWGGWWF
WDPVENASLM PWIAGTALLH STVVMEKRDA LKVWTVLLAI LTFSLSLIGT FLVRSGVITS
VHSFATDPTR GVFILAILVL FIGGSLTLFA WRAPLLRQGG LFAPISREGS LVLNNLFLVA
ACATVLVGTL YPLVLEMLTG EKITVGPPFF NSTFVPLAIP LLLIVPMGQS LAWKRGDVLA
AAQRLFAALA VALVVGFGVL ALTWGGPVMA PVGIGLGAYL LIGSALEIVT RARGYGASRA
RSLGQIGRRA VGLPRSAWGT AIAHAGVGVV VLGIAAQGWA TEGLATLKAG QSLATGPYVA
TLDRVAPRKG PNYEEAAAYL TIRTRGGDEV GQVETGKRFY PSRKMAVTES GLLTVGASQV
YASLGEIGQD GGVGLRLYYK PLVLLIWLGA VVMAVGGGLS LTDRRMRVGV PAKAKARPLP
VAVPAE
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