Gene Mrad2831_4890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_4890 
Symbol 
ID6140958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand- 
Start bp5219880 
End bp5220866 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content74% 
IMG OID641630600 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_001757533 
Protein GI170751273 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.860697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00876113 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGCGA GCGCCCGACC GGACCTGACG GGCGCCGGAG CGGACCCGGA GGCCATGGTG 
AAGCGGATCC GGGCGGGTCT CGTCGCGGCA GGACTCGCGC TGCTGGTCGC CCAGTGCGCG 
CCCACGCCCG GCGCGCCGGC GGCCGGGATC GTCGTCGCCT CCAAGCTCGA CACCGAGGGC 
GGGGTGCTGG GCAACATCAT CCTGCAGGCG CTGCAGGCCC GGGGCCTGCC GATCGTCGAC 
AAGATCCAGC TCGGCGCGAC CGCGATCGTC CGGCAGGCCC TGATCGAGGG GCAGATCGAC 
GTCTACCCGG AATACACCGG CAACGCGGCG TTCTTCTTCG GGAAGGCCGA TCTCCCGGTC 
TGGAAGGATC CGGAGGCGGC CTACCGCACG GCCCGGGACC TGGATCGCGC GGCCAACGAC 
CTCGTCTGGC TGACGCCCGC CTCGGCCAAC AACACCTGGG CGATCGCCGT GCGCCAGGAG 
ATCGCGCGGG CCGCGGGCCT GAGGACCATG AGCGACCTCG GCCGCTACGT GGCGGGCGGC 
GGCGCGATCA GGCTCGCCGC CTCGTCGGAA TTCGTGACCA GCCCGGGGGC GCTGCCGGCC 
TTCGGCCGCG CCTACGGCTT CACCCTCCGG CCGGACCAGC TCGTCATCCT GGCCGGGGGC 
GACACGGCCG CCACGATCGC GGCGGCGGCG CGGGGCACCT CCGGCACGAA CGCCGCCATG 
GTGTTCGGCA CCGACGGCAG CATGGCGGTC GCGCGCCTCG TGATGCTGGA CGACGACAAG 
GGCGTCCAGC CGGTCTACCA GCCGGCGCCC GTGGTCCGCG GCGCGGTCCT CAAGGCCCAT 
CCGGAGATCG CCGCGGTGCT GGACCCGATC TTCCGCAGGC TCGATCTGGC CACGCTCCGG 
GATCTCAACG GGCGGGTCCA GATCGGCGGC GAGCCGGCCT CCGCGGTCGC GGCGGACTTC 
CTCCGGCGGA ACGGGTTCGC GCGCTGA
 
Protein sequence
MKASARPDLT GAGADPEAMV KRIRAGLVAA GLALLVAQCA PTPGAPAAGI VVASKLDTEG 
GVLGNIILQA LQARGLPIVD KIQLGATAIV RQALIEGQID VYPEYTGNAA FFFGKADLPV 
WKDPEAAYRT ARDLDRAAND LVWLTPASAN NTWAIAVRQE IARAAGLRTM SDLGRYVAGG 
GAIRLAASSE FVTSPGALPA FGRAYGFTLR PDQLVILAGG DTAATIAAAA RGTSGTNAAM 
VFGTDGSMAV ARLVMLDDDK GVQPVYQPAP VVRGAVLKAH PEIAAVLDPI FRRLDLATLR 
DLNGRVQIGG EPASAVAADF LRRNGFAR