| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4865 |
|---|
| Symbol | fumC |
|---|
| ID | 6140933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 5195145 |
|---|
| End bp | 5196602 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641630575 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_001757508 |
|---|
| Protein GI | 170751248 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.649966 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGC CCGTCCCGGA CCATCCCGTC CTGCGCGATG TCCCGATCGG CATCTCCGCC
ACGGGGATGC GGCGGGAGAC GGATTCGATG GGCGGGATCG ACGTTCCGGC GGACCGCTAC
TGGGGCGCGC AGACCCAGCG CTCGCTCCAG CATTTCTCGA TCGGCAACGA TCGCATGCCG
AAGCGGGTCT ACCACGCCTA CGGCTACGTC AAGAAGGCCG CCGCCCTGGT CAACGCCGCC
GCCGGGCGGC TGGAGGATTG GCGCGCGCAG GCCATCGTCC AGGCCGCCGA CGAGGCGATC
GCGGGGAAGC TCGACGCGAA CTTCCCGCTC TACGTCTGGC AGACCGGTTC CGGCACCCAG
TCCAACATGA ACGTCAACGA GGTGCTGTCG AACCGCGCGA TCCAGCTCCT CGGCGGTGAA
CTCGGCTCCA AGAGCCCGGT CCATCCGAAC GACCACGTCA ACATGGGCCA GTCGTCGAAC
GACACCTTCC CGACGGCGAT GCACATCGCC ACGGTGCTCG AACTCGACGA GGTCCTGCTC
CCGCAGGCGC GGGCGCTGGC CGACGCGATC GACGCCAAGG CGCGGGCCTG GATGGACGTG
GTCAAGACCG GAAGGACCCA CCTCCAGGAC GCGACGCCCC TCACGGTCGG CCAGGAATGG
TCGGGCTACG TGGAGCAGAT GCGCGACGCG CTGGCCCTGG TCGAGGCGTC GCGCGCCGGG
CTGTACAAGC TCGCGGCCGG CGGCACCGCG GTCGGCACCG GCCTCAACGC CCCGGAGGGC
TTCAGCGCCG AGATCGCCGC CAAGATCGCC GACCTCACCG GCAGGCCGTT CGTCACGGCG
CCGAACAAGT TCGCCGCGCA GGGGTCGCTG GACGCCATGG TCGCCGCCAT GGCGGCGGTG
CGCGGGCTCG CCGTCGCGCT GATGAAGATC GCCAACGACA TGCGCTGGCT CGCCTCGGGG
CCGCGCTGCG GGCTCGGCGA GCTGCTGCTG CCGGCCAACG AGCCGGGCTC CTCGATCATG
CCCGGCAAGG TCAACCCGAC CCAGTGCGAG GCCATGGTGA TGGTCTGCAT CCAGGTGATC
GGCGAGGACA ACGCGGTCGC CTTCGCGGGG GCGCAGGGCA ATTTCGAGCT GAACGCGATG
CGCCCGATCA TCATCAACAA CACGCTGCAC GCGATCCGCG TGCTGGGCGA TGCCTGCGAG
AAGTTCCGGA CCTACTCGGT CGCGGGCACG GAGCTCAACC GGAAGCGGAT CGACGAGACC
GTGAACCAGT CCCTGATGCT GGTCACGGCC CTGTCGCCGG TGATCGGCTA CGACCTCGCC
TCGAAGATCG CCCACCGCGC CAACGACGAG GGCACGACGC TGCGCGCGGC CGCCCTGGCC
GAGGGCGTTC CGGCCGAGCG CTTCGACGCG GTGTGCGATC CCAAGACCAT GATCGGCCAC
GGGCTGGCCG GCGCCTGA
|
|---|
| Protein sequence | MNAPVPDHPV LRDVPIGISA TGMRRETDSM GGIDVPADRY WGAQTQRSLQ HFSIGNDRMP
KRVYHAYGYV KKAAALVNAA AGRLEDWRAQ AIVQAADEAI AGKLDANFPL YVWQTGSGTQ
SNMNVNEVLS NRAIQLLGGE LGSKSPVHPN DHVNMGQSSN DTFPTAMHIA TVLELDEVLL
PQARALADAI DAKARAWMDV VKTGRTHLQD ATPLTVGQEW SGYVEQMRDA LALVEASRAG
LYKLAAGGTA VGTGLNAPEG FSAEIAAKIA DLTGRPFVTA PNKFAAQGSL DAMVAAMAAV
RGLAVALMKI ANDMRWLASG PRCGLGELLL PANEPGSSIM PGKVNPTQCE AMVMVCIQVI
GEDNAVAFAG AQGNFELNAM RPIIINNTLH AIRVLGDACE KFRTYSVAGT ELNRKRIDET
VNQSLMLVTA LSPVIGYDLA SKIAHRANDE GTTLRAAALA EGVPAERFDA VCDPKTMIGH
GLAGA
|
|---|
| |