Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_4673 |
Symbol | |
ID | 6140741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 4972570 |
End bp | 4978512 |
Gene Length | 5943 bp |
Protein Length | 1980 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641630389 |
Product | putative DNA helicase |
Protein accession | YP_001757322 |
Protein GI | 170751062 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.736151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCAGGACG GTATCCAGAT CACGTGCTCG GCGACCGAGC ACGTCAGCCT CGCCTACCAC GAGAATGCGA TCCCGGTCGT CCGGGAGCTT GTGGTCGCGA ACGCTTCTGA GAGCGATCTC GTTGACGTCA CGCTACGCAT TGAGAGCCGA CCGGCGGTCG TGCATCCGCT CACGCTGCGC ATCGATCGGA TCCCGGCCGG GTCGGACCAC CACATCGAGA CGCCGGATCT CCGCCTCGAT GCCGCGCTGC TGGCGGGGTT CACCGAGGCC AGTCGCCTGG AATTGACGGT GATCCTGGAC GATGCGACCG GCGAGAGAGC CAGGCTCGTC GAGGAGCTAC GCCTACTGCC GCCCTCGCAC TGGGGTGGCG GTCGAAGTGC GCCCGAGCTT CTCGCCGCCT TCGTCCGACC CAATGACCCG GCGGTCGACG TCGTCCTACG CGACGCAGCG ACCAAGCTCG GCGATGCCGG ACGTGAGACC GGTCTGAACG GCTACGCGAC CGGGAAGAAG TCCCGCAGCT GGGAGCTCGC CGAGGCGATC TGGGCAGCAC TCGCGGATAG GCGCATCGTC TACGTGCTGC CGCCGGCGAG CTTCGAGCAG GCGGGCCAGA AGGTCCGCGG CCCGAGTGAC GTGTTGGAGC GCAAGGTCGG GACCTGTCTC GATCTCTCAC TGCTCTACGC CGCCTGCCTC GAACAGGCTG GTCTCAACCC GGTACTCGTG CTGACCGCCG GCCATGCCTT CGTCGGCGTC TGGCTTCAGG ATGAGGATTT TACGAGCGCC GCCGTCGACG ACATGCAGCT CCTGCGCAAG CGGCGCGACC TGCAGGATCT GATCCTCGTC GAGACGACGC TCCTGACCCA CAACCCGCCG GCTACGTTCA AGGTCGCCAC GGCACAGGGG AGCGTCCAGG TCGAGGACGA AGCGCCCGCG GCGCTCGAAG TCGCTATCGA TGTCCGGCGC TGCCGCCGGC GCGGCATCCG CCCGATGGAC CTCGGCGGCG CGAAGCCCGG TGACGTCGCG CCTGCGCCAA CCCAGCCCAT CAATCAGCCA CTCGGCTCGA CACCGATCTT CGACGACGAG CCGCGTGCGC CCGTCGACGA AGCTCCGGAG ACTCCAGTCG GACGCGTCGA GCGCTGGAAG CGCAAGCTGC TCGACCTGAC GCTCCGCAAC AAGCTCCTGA ACTTCAAGCC TGGCAAAGGC TCCGTCGTCC TCGAGTGCGT CTCGCCAGGG ACGTTGGAAG ACGGCCTCGC GGCGGGGACC GAGTTTCGTC TCAAGCCGCT CTCGGACGTG CTGACCGGGT CCGACGAGCG CAGCGCAGAT CTCTACGCGC GCCGTCATCA CGATGACGGC CGCCGCAGCT ACCTCGAGGC GGCGCTCGCC CGGAAGGAGA TCTATACGAC CTCGACCGAG GCGGACCTCG ACCGTCGCTT GCTCGATCTC TATCGGCTCG CCCGCAACGG CTTCGAGGAA GGCGGGGCCA ATATCCTCTT CCTCGCGATC GGCTTCCTGT CCTGGACCAA GAAGGAGGGC GAAGCCGCCT ATCGCGCCCC GCTCCTCCTC GTCCCGGTCA CCCTCAAGCG ATCGAGCGTG CGAGCCGGTT TCAAGCTCGC CCTCCACGAC GACGAGGTGC GGATCAACCC GACCCTGCTC GAGATGCTAC GCGAGGACTT CAAGCTTCGC ATGCCGGAGC TGGAGGGTGA TCTCCCCCGG GATGATTCCG GGTTCGACGT CGACGGCATC TTCCGGATCG TCCGCCAGCA CGTGAAGGAA TTGCGCGGCT GGGAGGTGGT GCCGGACGTC GTGCTCTCGG CTTTCTCCTT CGCCAAGTAC CTGATGTGGA AGGACTTGGT AGACCGGGCG GAGGTGCTGA AGCGCAACCC CGTCGTGCGC CATCTCATCG ACACGCCGAA GCATTCCTAC GGCGACGGCA CGCCGTTTCC AGAGCCCACG CGTCTCGACT GGGAGCATCC GCCGGAGACC GTGTTCGCGC CGCTCTCAGC AGATTCCTCG CAGCTCTCCG CGGTCCTGGC CGCGGCCGGT GGCAAGGACT TCGTGCTGTT CGGGCCACCG GGCACCGGCA AGAGCCAGAC GATCGGCAAC ATGATCGCCC AGTGCCTCGC GCAGGGGCGA ACCGTGCTGT TCGTCTCGCA AAAGACGGCG GCCCTGGAGG TCGTGCAGCG CCGCCTGCAG GAGATCGGCC TCGGCGACTA CTGCCTGGAG GTCCATTCGA CCAAGGCGCA GAAATCGGCC GTTCTCGGCC AGTTACGTCG GGCCTGGCAC GAGCGCTCGA CCCCGTCGCA GGGTACCTGG GACGCGGCGA CCAGCGAACT CGCGAGCCTG CGCGAGGAAC TCAACGGCCT CGTGAGCGCC CTGCATCGGC GGCGCGAGAA TGGGCTCTCC GCCTACGAGG CGTTCGGGCG CGTGATCGCG GCCGGCAATG GCGAGCCTCC GCTCGTCCTG ACATGGCCGG ATCACCTCGC CCACAACGAG ACGACGCTCG CCAACCTGCG CACCGCCTGC CGGGAGCTTC GCCCCGTCCT GGCCTCGGTC GGATCGCTGG TCGATCACCC GCTTCAGGGC GTCGAGGCTA CTCAGTGGTC TCCGGTCTGG CGCGACGATA TGGGCGCAGC GATCCGGACC GTCGAGCAGA CGCTCGGCGC GCTCCGTGTC AGCGGTCAGG CGTTCGCCGA GGCAATCGGT CTGCCCACCC TTCTTGCGAC CTATGCCGGC ACGCGCGGGC TCATGGTGCT CGGCAACTAC CTGGTACGCC CCGAGGCGCG CTGCGGGGCC GCCTTCCTCG CCGACGGCGC GGGTGACCTG CGTCGGGCCG TCGCTGCACG CGAGCGCTTC CAGACGACGA AGGCCCAGCT GCTCGGCCGG CTCACCGGTC GCTACCGTCC GGGCATCCTC GATCAGAATC TGAGCGCACT TCTGGCCGAC TGGGTCGCCG CGCAGGCGTC GAACTTCCTG GTGAAGGGCG GCAAGCTGAA GAAGGTGTCC GCACAGGTTC AGCCCTACGC GGAGGGTCCG CTGCCAGCCG ATCTCGGGCC GGATCTCACG GGGCTGATCG AAGTCGCCAA GCACGTCAAA GCCGGATGCC TGGAGGAGTT GATCCTCGCC CGGCTCGGGT TGCCGTGGAG CAATCCGGAC TGCGCGGCGT CCGAGTTCAC CCCGGCGATC ACCTGGGCGG AAAAGGTCGA GCAACTGCTC GACATCCTCG GGCCCCTGTC GCTCGGGATC GACGGTCTGC GCGATCACCT CATACACCTC GTCGAGCGCC AGGGCCGCGC CCTCGCGGAG GGCGGCCGCA TCGCGCAGAG CTACGCCGCC TTCGCGCAGG ATCGCACCCG GGCGACCGAG GCCACGAAAG CGCTCGGCCT CCTGGCTGGA CGTTCCGATC CCGAGGAGCC GCTGGCGGCA GACGCCGACT GGATCGAATC GAGCATCGCC CTCGCTCGAC GCTGGGCATC TGGTCTCGGA CGTGCCCAAG GCTGGTGCGC GTGGCAGGCA GCGGCGCAGA ACGCGCGCAA GACCGGCCTC ACGCCGCTGA TCGAAGCGCT CGAAGAGGGT CGTGTCACGC CCGAGCAGGC CGAGGTGGCG TTCGAGACCG CTTATGCGCG CTGGTGGATC GACCGCGTCG TCAGCCACGA TCCGGTGCTG TGTCGGTTCC TGCCCGAGCG GCACGAGGAT GCGATTCAGC GTTTCCGCGC CGCCGATGCC CGCGTCACGG AACTCTCGAA ACAGGTCGTC CGCTCGCGTC TCGGCGGCGG CATCCCGGGA GCGACCGCCT TCGGGGCTGA CCCTGAATGG GGCACGCTCT CCCACGAGTT GACGAAGAAG ACGGCGCACA TGCCGCTGCG CAAGCTGTTC GGCCGGATGC CGACGGCGCT GACCAAGCTC ACCCCCTGCG TGATGATGAG CCCGCTCTCG ATCGCGCAGT ACCTGCCGCC CGACAAGGAG CCGTTCGACG TCGTCATCTT CGACGAGGCG TCCCAGATCT CGCCGTGGGA TGCGGTCGGC GCGCTCGCCC GGGCGAAGCA GGTCGTCATC GTCGGCGACC CAGAACAGCT GCCGCCGACC AATGTCGGCG ACCGCGGCGT CGATGACATC GAGGATGGCA GCGACGTCAC GGATCAGGAG TCGATCCTCG ACGAGTGCCT GGCCGCCAAC ATCCCCCGGC GGAACCTCGA CTGGCACTAC CGCAGCCGCC ACGAGAGCCT GATCGCCTTC TCGAACAGCC GCTACTACGG CGGCCGGCTC GTGACCTTCC CGTCGCCCGT GACCGACGAC CGGGCGGTCC GGCTCACCCT CGTGCCAGAC GGAGTCTACG AGCGAGGCGC GGGCCGCGTG AACCGCCCCG AGGCCCGCGC CGTGGTCGCT GACATCATTC GCCGTCTGCG CGATCCGGCC TTCGCCGCCG AGCACCGCTC CCTTGGCATC GTCACCTTCA ACGGTGAGCA GCAGCGGTTG ATCGAAAACC TCCTAGACGA GCAGCGGCGT TCGTATCCCG AACTGGAGCC GTTCTTCGAC AAGGATCGCT GGCACGAGCC GGTGTTCGTG AAGAACCTCG AAAACGTGCA GGGCGACGAG CGAGACGTCA TCATTTTCTC GGTCGCGGTC GGGCCGGACC AAAGCGGGCG TCCGGTCAGC ACGGTGTCGT CGCTCAACAA GGACGGTGGT CACCGCCGCC TGAACGTCGC GATCACGCGC GCCCGGCGCG AACTCGTCGT ATTCGCGTCC TTGCGGCCCG AGCAGATCGA CCTCGGCCGC ACCCGGGCGC GCGGTGTCCG CGATTTCAAG CACTTCCTCG AGTTCGCCGA CCGCGGCGCA CGCGCTCTCG CCGAGGCCTT CTCGCCGACC GGCGGCGACG TCGAATCACC GTTCGAAGCC GCCGTGATGG CCGGTCTCCA GGCCAGAGGC TGGACCGTCC ATACGCAGAT CGGCGTGTCC GGCTTCCGGA TCGACCTCGG CATCGTCCAC CCCGACGCAC CGGGGCGCTA CCTCGCCGGC GTCGAGTGCG ATGGCGCGAC CTACCACAGC TCAGCCACCG CCCGGGACCG CGACCGCCTG CGCGAGCACG TGCTGACCGA CCTCGGATGG CGGATCCGCC GTGTGTGGAG CACCGAGTGG TGGATGGACG CCGAAGGGGC GCTCGCCAAG CTCGATCAGC GCCTTATCGA GGATCTCGAA GCCGATCGCG CAAGGGATGC GGCGGCATCT CCAGTTGACC CTGCTGTCAA ACCCGAGGCC GTCGAGCAGG ATCGTGACGA CACGACGGAG GAGGCGGCAG TCGCTTCGCC CATCGTAGAC CCGCCGAGCG AACCGGCGAA TGACCCAGAG CCCATCAGCG AAGCCATTCC GCAGCGCCTC TACGCGGATC AAGTCGTGCC GATCACCCCG CCCGCCCCGA GGCTGCACGC CCCTGAGGAG GTGCGGGGCT ACCGGATCGC CGATCTGAAT GATCTCGGCC GGCCGGTCGA ACCAGGCCGG TTCTATGATG CGTCCTACCG GCCGGCGCTC AGCGCCATGG TGGATCACGT CCTCTCCGTT GAAGGGCCGA TATACGAGGA ACTGCTTATC CGGCGCATTG CCCGCGCTCA CGGCCTCCAG CGCGTCGGTC CTCTCGTCCG TGAAGCTATC GCTGCCCAGA TCGATGCGTC CGTCGCGCGC ACCGACGACG AGGGACGTCC CGTTCTGTGG CCGCCCGGCG AGGAGCCCAG GACGAGCTAT CCATACCGAC CGGCCGACGC GACCGTCCGC AGTCACACCG ACACGCCCAT GCCGGAGCTC GTCGGAATCG CGATGACCCT GCAGTCGAAC GCCTCAGAGG CGGAGCGCGC CAGGTTGATC GGCCAGCGTC TAGGGCTGTC ACGCATCGAA GCTTCAGCGC GGTCTCGGTT CGAGAAGGCG AGCGAACTCG CCCGCCAGTC AGCCGTGTCG TGA
|
Protein sequence | MQDGIQITCS ATEHVSLAYH ENAIPVVREL VVANASESDL VDVTLRIESR PAVVHPLTLR IDRIPAGSDH HIETPDLRLD AALLAGFTEA SRLELTVILD DATGERARLV EELRLLPPSH WGGGRSAPEL LAAFVRPNDP AVDVVLRDAA TKLGDAGRET GLNGYATGKK SRSWELAEAI WAALADRRIV YVLPPASFEQ AGQKVRGPSD VLERKVGTCL DLSLLYAACL EQAGLNPVLV LTAGHAFVGV WLQDEDFTSA AVDDMQLLRK RRDLQDLILV ETTLLTHNPP ATFKVATAQG SVQVEDEAPA ALEVAIDVRR CRRRGIRPMD LGGAKPGDVA PAPTQPINQP LGSTPIFDDE PRAPVDEAPE TPVGRVERWK RKLLDLTLRN KLLNFKPGKG SVVLECVSPG TLEDGLAAGT EFRLKPLSDV LTGSDERSAD LYARRHHDDG RRSYLEAALA RKEIYTTSTE ADLDRRLLDL YRLARNGFEE GGANILFLAI GFLSWTKKEG EAAYRAPLLL VPVTLKRSSV RAGFKLALHD DEVRINPTLL EMLREDFKLR MPELEGDLPR DDSGFDVDGI FRIVRQHVKE LRGWEVVPDV VLSAFSFAKY LMWKDLVDRA EVLKRNPVVR HLIDTPKHSY GDGTPFPEPT RLDWEHPPET VFAPLSADSS QLSAVLAAAG GKDFVLFGPP GTGKSQTIGN MIAQCLAQGR TVLFVSQKTA ALEVVQRRLQ EIGLGDYCLE VHSTKAQKSA VLGQLRRAWH ERSTPSQGTW DAATSELASL REELNGLVSA LHRRRENGLS AYEAFGRVIA AGNGEPPLVL TWPDHLAHNE TTLANLRTAC RELRPVLASV GSLVDHPLQG VEATQWSPVW RDDMGAAIRT VEQTLGALRV SGQAFAEAIG LPTLLATYAG TRGLMVLGNY LVRPEARCGA AFLADGAGDL RRAVAARERF QTTKAQLLGR LTGRYRPGIL DQNLSALLAD WVAAQASNFL VKGGKLKKVS AQVQPYAEGP LPADLGPDLT GLIEVAKHVK AGCLEELILA RLGLPWSNPD CAASEFTPAI TWAEKVEQLL DILGPLSLGI DGLRDHLIHL VERQGRALAE GGRIAQSYAA FAQDRTRATE ATKALGLLAG RSDPEEPLAA DADWIESSIA LARRWASGLG RAQGWCAWQA AAQNARKTGL TPLIEALEEG RVTPEQAEVA FETAYARWWI DRVVSHDPVL CRFLPERHED AIQRFRAADA RVTELSKQVV RSRLGGGIPG ATAFGADPEW GTLSHELTKK TAHMPLRKLF GRMPTALTKL TPCVMMSPLS IAQYLPPDKE PFDVVIFDEA SQISPWDAVG ALARAKQVVI VGDPEQLPPT NVGDRGVDDI EDGSDVTDQE SILDECLAAN IPRRNLDWHY RSRHESLIAF SNSRYYGGRL VTFPSPVTDD RAVRLTLVPD GVYERGAGRV NRPEARAVVA DIIRRLRDPA FAAEHRSLGI VTFNGEQQRL IENLLDEQRR SYPELEPFFD KDRWHEPVFV KNLENVQGDE RDVIIFSVAV GPDQSGRPVS TVSSLNKDGG HRRLNVAITR ARRELVVFAS LRPEQIDLGR TRARGVRDFK HFLEFADRGA RALAEAFSPT GGDVESPFEA AVMAGLQARG WTVHTQIGVS GFRIDLGIVH PDAPGRYLAG VECDGATYHS SATARDRDRL REHVLTDLGW RIRRVWSTEW WMDAEGALAK LDQRLIEDLE ADRARDAAAS PVDPAVKPEA VEQDRDDTTE EAAVASPIVD PPSEPANDPE PISEAIPQRL YADQVVPITP PAPRLHAPEE VRGYRIADLN DLGRPVEPGR FYDASYRPAL SAMVDHVLSV EGPIYEELLI RRIARAHGLQ RVGPLVREAI AAQIDASVAR TDDEGRPVLW PPGEEPRTSY PYRPADATVR SHTDTPMPEL VGIAMTLQSN ASEAERARLI GQRLGLSRIE ASARSRFEKA SELARQSAVS
|
| |