| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4022 |
|---|
| Symbol | |
|---|
| ID | 6140079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 4267114 |
|---|
| End bp | 4268328 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641629733 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001756677 |
|---|
| Protein GI | 170750417 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.339015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.405471 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTGA TCCGGAGCTG CGTCCTCTCG GTCGCGATCG GCATCGCCGT GCTCGCCGGA
CCGGCCGCCG CCGAGCCGAT CCGCGTCAAG GTCGGCGTCC TCAACGACAT GTCGGGCGTC
TACGCCGATA CCGGCGGCAA GGGCTCCGTC GTCGCCGCGC AGATGGCGGT CGAGGATTTC
GCCAAGACCA GCCCGGACGT GCAGGTCGAG ATCGTCTCGG CCGACCACCA GAACAAGCCC
GACGTCGGCG CCGCCGTCGC CCGCCAGTGG TACGACCGCG ACGGCGTGGA CGCGATCCTC
GACGTGCCGA CCTCCTCGGT GGCGCTGGCG GTGAGCCAGG TCACCCGCGA GAAGAACAAG
ATCTTCATCG ACTCGGGGGC CGGCACCACG GAGCTGACCG GCAAGCAATG CTCGCCGAAC
ACGATCCAGT GGACCTACGA CACCTACGCC CTCGCGCACG GCACGGCCGG CGCCATGCTC
AAGCGCGGCG GCGACACGTG GTACTTCCTC ACCGCCGACT ACGCGTTCGG CCTCTCCCTG
CAGAACGAGG CGAAGGCCGT GATCGACGCG GGCGGCGGGC GGGTGCTGGG CGCCGCCCGA
GTCCCGTTCC CCGCCACGGA CTTCTCCTCG TTCCTGCTGC AGGCGCAGGC CTCGGGCGCG
AAGGTGGTGG GTCTGGCCAA CGCGGGTGGC GACACGGTCA ACGCGGTCAA GCAGGCGCAC
GAGTTCGGGC TGACCGACGG CGGCCAAAAG CTCGCCGCCC TGCTGATCTA CGCCGTTGAC
GTCCACGCGA TCGGCCTGCA GACCGCGCAG GGGCTGGTGC TGACCGAGTC GTTCTACTGG
GATCTCAACC CGGAGACGCG GGCCTTCTCG GAGCGCTTCT ACCCGCGCAA CGGCAACACC
ATGCCGACGA TGAACCATGC GGGCGTCTAT GCCGGGCTCC TGCACTACCT GAAGGCCGTG
GCGGCCACGA AGTCCACGGA CCCGCAGAAG ACCATGGCGT GGATGAAGGC CAACCCGACC
GACGACCCGC TGTTCGGCAA GGGCGTCGTC CGGGCGGACG GCCGCAAGAT CCACCCGATG
TACCTGTTCG CCGTGAAGGC GCCGTCCGAG TCGAAGGGTC CGTGGGACCT CTACGAGCTC
CTCGACACGA TCCCCGCCGA GCAGGCCTTC CGCCCCCTGG CCGAGGGCGG CTGCCCGCTC
GTCGCCAAGC CGTAG
|
|---|
| Protein sequence | MALIRSCVLS VAIGIAVLAG PAAAEPIRVK VGVLNDMSGV YADTGGKGSV VAAQMAVEDF
AKTSPDVQVE IVSADHQNKP DVGAAVARQW YDRDGVDAIL DVPTSSVALA VSQVTREKNK
IFIDSGAGTT ELTGKQCSPN TIQWTYDTYA LAHGTAGAML KRGGDTWYFL TADYAFGLSL
QNEAKAVIDA GGGRVLGAAR VPFPATDFSS FLLQAQASGA KVVGLANAGG DTVNAVKQAH
EFGLTDGGQK LAALLIYAVD VHAIGLQTAQ GLVLTESFYW DLNPETRAFS ERFYPRNGNT
MPTMNHAGVY AGLLHYLKAV AATKSTDPQK TMAWMKANPT DDPLFGKGVV RADGRKIHPM
YLFAVKAPSE SKGPWDLYEL LDTIPAEQAF RPLAEGGCPL VAKP
|
|---|
| |