Gene Mrad2831_3945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3945 
Symbol 
ID6140000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4197542 
End bp4198429 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content72% 
IMG OID641629656 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001756602 
Protein GI170750342 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAGC CCCGCGGCCG CGCCTTCTAC CTGCTGGCGG CGGTCTTCGC CCTCTACGTC 
CTGTTCCTCT ACGGGCCGAC CCTGACGATC CTGGCGCTCA GCTTCCAGGG CCCGTCCGGC
GGCTTGACCT TCCCGATGAA CGGGGTCTCG ACCCACTGGT TCGCCAAGCT GTGGGAAGGC
GTCGGCGTCG TCGACATCTG GGCGGCGTTC CGGCGCTCCC TGGCCCTCGG CCTCGCAGTG
ATGGCGCTCA CCGTGGGGAT CGCGTTCTAC GCCGGCCTCG CCTTCCGGAA GGGGTTTCGC
GGGGCCGGCC TCGTCTTCGC CCTCGCCGTG TCGAGCCTGA TCGTGCCCTC GATCGTGGTC
TCGCTGGGGA TCGGGCTGGA GTTCCGGCTC CTCGACGACG CCGTGAAGGC CCTCGCGGCC
GCGACCGGCT GGGGATTCCT GCAGGACCAC GGCACGCTGA TGGGCCTCTA CACCTCGGCG
CTGGGGGCGC ACCTCACTTG GACGCTGCCC TTCGGCCTGC TGATCATGTT CGCGGTGTTC
AACCGGTTCG ACCCGGCCTA CGAGGAGGCC GCCCGCGACC TCGGCGCCAG CGGCCCGCAG
ACGCTCCGGC ACGTGGTCGT GCCGATCCTC GCGCCCGCGC TCGTCGGCGT CGCGCTGTTC
GGCTTCACCC TGTCGTTCGA CGAACTCGCC CGCACCAGCC AGGCGATCGG CGGCCGCAAC
ACCCTGCCGC TGGAGCTGCA GGGCCTGACC ACCACGGTGA CGACGCCGGA GATCTACGCC
CTCGGCACGG TGACCACGGC GGTCTCGGCG CTGGTGATCG GCACGGCGCT CGGCCTGACC
CTGTGGCTGC AGAAGCGCCG GGCGCGGCGG GCGCTGGCGG GCCTGTGA
 
Protein sequence
MDQPRGRAFY LLAAVFALYV LFLYGPTLTI LALSFQGPSG GLTFPMNGVS THWFAKLWEG 
VGVVDIWAAF RRSLALGLAV MALTVGIAFY AGLAFRKGFR GAGLVFALAV SSLIVPSIVV
SLGIGLEFRL LDDAVKALAA ATGWGFLQDH GTLMGLYTSA LGAHLTWTLP FGLLIMFAVF
NRFDPAYEEA ARDLGASGPQ TLRHVVVPIL APALVGVALF GFTLSFDELA RTSQAIGGRN
TLPLELQGLT TTVTTPEIYA LGTVTTAVSA LVIGTALGLT LWLQKRRARR ALAGL