| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3943 |
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| Symbol | |
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| ID | 6139998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 4195259 |
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| End bp | 4196521 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641629654 |
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| Product | ABC spermidine/putrescine transporter, periplasmic ligand binding protein |
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| Protein accession | YP_001756600 |
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| Protein GI | 170750340 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.627454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.644555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC CCTCGAAGCC GAGCCGCCGC ACGCTCCTGA AGGGGGCGGC CGCGCTCGCC
GCGACGCCGG TGACCGGCTT CCCGGCGGTG CACGCCGCCG AGCCCGTGAC CCTGCGCTAC
CTCGGGACCG CGGTGAACCA GTCCGCCGAC ATCGCCCGGA AGGTGAAGGA GGATCTCGGC
CTGACCATCG AGTACATCCC GGTGGTGACG GACGAGGTGA CCAAGCGGGC GGTCACCCAG
CCGAACTCCT TCGACCTGAT CGACACCGAG TATTTCAGCC TCAAGAAGAT CCTGCCCTCC
GGCAACCTGC AGGGCATGGA CGCCGGGCGG ATCAAGCTCG CCGACAAGAT CTCTTCCATT
TTCACCAAGG GGGAAGTGGC GGGAAAGCGG ATCGGCGACC AGGGCACGGC GCCCCGCAAG
GTCTTCTACC TGGAGGGCCA GGAGTCCAAA AAATTTGCCG GCGAACAGAC CGGGTGGATC
TCGCTGATCC CGACCGTCTA CAACGCCGAC ACGCTGGGCA TCCGGCCGGA CCTGATCAAG
GTGCCCGTCA CGAGCTGGAA GGAGCTCCTG AACCCGGCCT TCAAGGGCAA GGCCTCGATC
CTCAACATCC CGTCGATCGG CATCATGGAC GCCGCCATGG TGGTGGAGGC GACCGGCGAC
TACACCTACG GCGACAAGGG CAACATGACG AAGCCCGAGA TCGACCGCAC CATCAAGGTG
CTGATCGAGG CCAAGCGCGC CGGCCAGTTC CGGGCCTTCT GGCAGGACTT CAACGAATCC
GTGAACCTGA TGGCCTCGGG CGAGACGGTG ATCCAGTCGA TGTGGTCGCC CGCCGTCACC
AAGGTGCGGG CGCAGGGCGT GCCCTGCACC TACCAGCCGC TGAAGGAGGG CTACCGGGCC
TGGGCCTCGG GCTTCGGCAT CCCCAAGACC CTGAGCGGCA AGAAGCTCGA CGCCGCCTAC
GATTTCATCA ACTGGTTCCT GTCGGGCTGG GCCGGGGCCT ACCTCAACCG GCAGGGCTAC
TACTCGGCCG TGCTGGAGAC CGCCCAGGCG AACATGCAGC CCTACGAGTG GGCCTTCTGG
ATGGAGGGGA AGCCCGCCGA GAAGGACATC CTCGGCCCCG ACGGCACCCT GATCGAGAAG
GCCGGCGCCA CCCGCGACGG CGGCTCCTTC GACGCGCGGA TGGGCGCGGT CGCCTGCTGG
AACGCCGTGA TGGACGAGAA CACCTACATG GTGCGCAAGT GGAACGAGTT CATCGCGGCG
TGA
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| Protein sequence | MDLPSKPSRR TLLKGAAALA ATPVTGFPAV HAAEPVTLRY LGTAVNQSAD IARKVKEDLG
LTIEYIPVVT DEVTKRAVTQ PNSFDLIDTE YFSLKKILPS GNLQGMDAGR IKLADKISSI
FTKGEVAGKR IGDQGTAPRK VFYLEGQESK KFAGEQTGWI SLIPTVYNAD TLGIRPDLIK
VPVTSWKELL NPAFKGKASI LNIPSIGIMD AAMVVEATGD YTYGDKGNMT KPEIDRTIKV
LIEAKRAGQF RAFWQDFNES VNLMASGETV IQSMWSPAVT KVRAQGVPCT YQPLKEGYRA
WASGFGIPKT LSGKKLDAAY DFINWFLSGW AGAYLNRQGY YSAVLETAQA NMQPYEWAFW
MEGKPAEKDI LGPDGTLIEK AGATRDGGSF DARMGAVACW NAVMDENTYM VRKWNEFIAA
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