Gene Mrad2831_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3843 
SymbolrplA 
ID6139897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4095170 
End bp4095868 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID641629554 
Product50S ribosomal protein L1 
Protein accessionYP_001756501 
Protein GI170750241 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0081] Ribosomal protein L1 
TIGRFAM ID[TIGR01169] ribosomal protein L1, bacterial/chloroplast 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.528602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.697118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGG AAGGCAAGCG CATCCGCGCC GCCCGCGAGG GCATCGAGGC GACCAAGCTC 
TACGCCCTCG ACGAGGCGAT CAAGCTGGTG AAGGAGCGGG CGACCGCGAA GTTCGACGAG
ACCGTCGAGG TCTCGATGAA CCTCGGCGTC GATCCCCGCC ACGCCGACCA GATGGTCCGC
GGCGTCTGCA ACCTGCCGAA CGGCTCCGGC CGGACGGTGC GCGTGGCGGT CTTCGCCCGC
GGCGCGAAGG CGGACGACGC CCGCGCGGCC GGTGCCGACA TCGTCGGTGC CGAGGATCTC
CTCGAGATCG TGCAGGGCGG CAAGATCGAG TTCGATCGCT GCATCGCGAC CCCCGACATG
ATGCCGCTGG TCGGCCGTCT CGGTAAGGTG CTGGGCCCGC GCGGCCTGAT GCCGAACCCG
AAGGTCGGCA CCGTCACCAT GGACGTGAAG GGCGCCGTCG CCGGCGCCAA GGGCGGCTCG
GTCGAGTTCC GCGTCGAGAA GGCCGGCATC GTCCACGCCG GCGTCGGCAA GGTCTCGTTC
GACGCCGACA AGCTCGTCGA GAACATCAAG GCCTTCGCGG ACGCCGTCGC CAAGGCGAAG
CCCGCGGGCG CCAAGGGCAC CTACGTCCAG CGCATCGCCG TCACCTCGAC GATGGGCCCG
GGCGTGAAGG TCGAGCCGAA CACGGTTCTG ACCGCCTGA
 
Protein sequence
MAKEGKRIRA AREGIEATKL YALDEAIKLV KERATAKFDE TVEVSMNLGV DPRHADQMVR 
GVCNLPNGSG RTVRVAVFAR GAKADDARAA GADIVGAEDL LEIVQGGKIE FDRCIATPDM
MPLVGRLGKV LGPRGLMPNP KVGTVTMDVK GAVAGAKGGS VEFRVEKAGI VHAGVGKVSF
DADKLVENIK AFADAVAKAK PAGAKGTYVQ RIAVTSTMGP GVKVEPNTVL TA