Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_3434 |
Symbol | lpxB |
ID | 6139482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 3647964 |
End bp | 3649142 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641629141 |
Product | lipid-A-disaccharide synthase |
Protein accession | YP_001756094 |
Protein GI | 170749834 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0763] Lipid A disaccharide synthetase |
TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.293347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.272129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGGCC GGCCCCGGAC GATCTGGCTC GTCGCCGGCG AGGATTCCGG CGACCAGCTC GGCGCCAAGC TGATGCGTGC CCTGCGCGAG GCCGCGCCCG ACACCGTCTT CGGCGGCGTC GGCGGCGAGG CCATGGCGGA GGCGGGGTTC GCGTCGCTGT TCCCGCTCGA TGACGTGGCG GTGATGGGCT ACCTGCCGGT TCTCGCCCGC GCCCGGACGC TGCTCCGCCG CATCCGCGAG ACGGTGTCGG CGACGATCCG CGCCCGGCCG GACGTGCTGG TGATCATCGA CAGCCCGGGC TTCACCCACG CGGTGGCCCG GCGGGTGCGC AGGGCGGCCC CCGGCATCCC GATCATCGAC TACGTGTCGC CGAGCGTCTG GGCGTGGCGG CCCTGGCGGG CGAAGGGCAT GCGTCCGTTC ATCGACCACG TCCTGGCCCT GCTCCCCTTC GAGCCCGACG CGCATCTGCG GCTCGGCGGC CCCCCCTGCA CCTATGTCGG GCACCCGCTG ATCGAGCGCC TCCCGGAGCT GCGCCCCGGC GCGGACGAGC GGGGGCGGCG CGACGCCGTG CCCTACAGCC TCGTGGTCCT GCCGGGCTCC CGTCGGTCCG AGATCGAGCG GCTGATGCCG GTCTTCGGCG CGGCCCTGGC ACGCGTGGCC GAGGGCCTCG CGGTCGAGGC GGTGCTGCCC GCCGTGACCC GGCACAGGGC CCTGATCGAG CGGCTCTCGG CCGACTGGGC GGTGCCGGTC CGCATCGTGA CCGGCGAGGC GCCGAAATAC GCCGCCTTCC GGGAGGCCCG GGCGGCGCTC GCCGCCTCCG GCACGGTCAC GCTGGAGCTG GCGCTCGCCG GCGTGCCGAT GGTCGTCGCC TACAAGGTCT CGCGGGCGGA GGAGTTCATC GCCCGCCGGC TGATCCAGGT CCCGAGCATC GTGCTGCCGA ACCTGATCCT CGCCGAGAAC GCGATGCCGG AATTCGTCCA GGCCGACTGC ACCCCGGAGC GCCTCGCGGG CGCCCTGCGG CCGCTCCTGG CCGGCGGTGC CGACCGCGAC GTCCAGCTCG CCGCCCTCGG CCGCATCGAC GGGCGGATGC GGCTCGCCGC GGCGGACACG CCGAGCCGCG CGGCGGCGCG GATCGTCCTG CGCGCGGCCG AGGGGCGGGG GCCGGGTCCG GCGGCGTGA
|
Protein sequence | MTGRPRTIWL VAGEDSGDQL GAKLMRALRE AAPDTVFGGV GGEAMAEAGF ASLFPLDDVA VMGYLPVLAR ARTLLRRIRE TVSATIRARP DVLVIIDSPG FTHAVARRVR RAAPGIPIID YVSPSVWAWR PWRAKGMRPF IDHVLALLPF EPDAHLRLGG PPCTYVGHPL IERLPELRPG ADERGRRDAV PYSLVVLPGS RRSEIERLMP VFGAALARVA EGLAVEAVLP AVTRHRALIE RLSADWAVPV RIVTGEAPKY AAFREARAAL AASGTVTLEL ALAGVPMVVA YKVSRAEEFI ARRLIQVPSI VLPNLILAEN AMPEFVQADC TPERLAGALR PLLAGGADRD VQLAALGRID GRMRLAAADT PSRAAARIVL RAAEGRGPGP AA
|
| |