Gene Mrad2831_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_1939 
Symbol 
ID6137968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp2062566 
End bp2063516 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content75% 
IMG OID641627646 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_001754617 
Protein GI170748357 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0139266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGA TCGCGATCGT CGGCGGCGGC GTGATGGGGC ACGGCATCGC CCTGGTGCTG 
GCGCTCGCCG GCCACGGCGT GCGGCTCACC GACACGCGGC CCGAGACCCG CGCGCGGATC
CCCGCCCTGA TGGACTCGGC CCTCGCGACC CTGCGGGAGG CCGGCGCCGC CCCGGAGGGC
TGGGATGCCG CGCGGCTGGC CCGGGCCGTC CGGGTCGAGG CGGAGCTCGG CGCGGCGGTG
TCGGGCGCCG GTCTCGTGAT CGAGGCGATC ACCGAGGACC CGGAGGCCAA GGGCGCGCTC
TTCTCCGAGC TCGACCGGCT CTGCCCGGCC GACGCGGTCC TCGCCAGCAA CACCAGCTAC
CTCGACGTCT TCCCGCTGAT CCCGGAACGC CGGCAGGCGC GGGCGCTGAT CCTGCACTGG
TACACGCCGC CCTACATCGT CGACCTGGTC GACGTGGTGC CGGGGCCCGG CACCGATCCG
GCGGTGATCG CCGCCATGGC CGAGTTCGTG CGCGGCCTCG GCCAGGTCCC GATCGTCCTG
AAGCGCTTCA TCCCCGGCTA CGTCGCCAAC CGCATCCAGC AGGCGATCAG CGCCGAGGTG
TTCCGGCTCC TCGACGAGGG CGTGGCCGCG CCGCGGGACA TCGACGACGC GATCGTCCAC
GGGCTCGCCC TGCGCATCCC GATCCTCGGC CACCTCGCCA AGGCCGACTT CACCGGCCTG
GAGCTGACGC AGCGGGCGCT CGCCAACGGC AGCTACGCGC CGCCGCCGCC GCGCACCCGG
TCCGAGACCC TCGACGCCCT CTGCGCCGCC GGCCGGACCG GGGTGATGGC GGGGCGCGGC
TACTTCGACT GGGGCGGGCG CGCGCCCGAG GAGCTGTTCC GCGAGCGCGA CCGCAAGCTC
CTGGCGCTCA AGGCGGCGAT GGCCGGGATC GGCCGGATGG AGGGAACATG A
 
Protein sequence
MGEIAIVGGG VMGHGIALVL ALAGHGVRLT DTRPETRARI PALMDSALAT LREAGAAPEG 
WDAARLARAV RVEAELGAAV SGAGLVIEAI TEDPEAKGAL FSELDRLCPA DAVLASNTSY
LDVFPLIPER RQARALILHW YTPPYIVDLV DVVPGPGTDP AVIAAMAEFV RGLGQVPIVL
KRFIPGYVAN RIQQAISAEV FRLLDEGVAA PRDIDDAIVH GLALRIPILG HLAKADFTGL
ELTQRALANG SYAPPPPRTR SETLDALCAA GRTGVMAGRG YFDWGGRAPE ELFRERDRKL
LALKAAMAGI GRMEGT