Gene Mpop_5414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5414 
Symbol 
ID6309805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5791967 
End bp5793013 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content71% 
IMG OID642654096 
Productsignal transduction histidine kinase 
Protein accessionYP_001928041 
Protein GI188584596 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AGAGCCCGGC CCCGGCCCGC ATCCTCTACA TCGACGACGA TCCCGGCCTC 
GGGCGCCTCG TGCAGCGCTC GCTCCAGGCG CGGGGCCTCT CCGTCGAACT CGCCGCGAGC
GGCGAGGAGG GGCTGGTACG GGCGCAGGCC GGCGGCTTCG ACCTCATCGC CCTCGACCAT
CACATGCCGG GACAGACCGG TCTCGACCTG CTGCCGGAAC TCCGCAGCCT GCCGGAGGCG
CCGCCGGTCA TCTACGTGAC CGGTTCGGAG GACAGCCGGG TGGCGGTGGC CGCCCTCAAG
GCGGGCGCGG TCGACTACGT CTGGAAGGAC GTGCAGGGTC AGTTCCGCGA GCTGCTCGGC
GAGGCGGTCG ATACCGCCCT GCGCCAGGAG GCGTTGCGGC GTGACAAGGA GCGCGCGGAG
GCCGCGGTCC GCGAGGCGCG CGACCGGGCG GAGCTTCTGC TCCGGGAGGT GAATCACCGG
GTCGCCAATT CGCTGACCCT CGTCGCGGCA CTCGCCCGCA TGCAGACCAA CGCGGTGGCG
GACCCGGCCG CCAAACAGGC GCTGGAGGAG ATGCAGGCGC GCATCTCGGC CATCGCCGGC
ATCCATCGCC GGCTCTACAC CTCGCAGGAT GTCGAGGCCG TGGAACTCGA CGCCTACCTC
GCCGGCCTCG TCGAGGAATT GCAGCTCGCC ATGAAGGCCT CGGGCCGCGA CCACGCCATC
CGACTTCAGG CCGCGCCGAT CCGGCTCGCC ACCGACAAGG CTGTCTCCCT CGGTGTCGTC
GTCACCGAAC TCGTCACCAA CGCCTACAAA TACGCCTATC CATCCGAGAC CCAGGGCGAG
ATCCGGGTTC AGGTGCTGTG CCAGGAGCCC GGCACGCTGT TGCTCACGGT GGAGGATGAC
GGCATCGGCT GGACGGGGGA CGGGGAGGCG AGGGGCACCG GGCTCGGCTC GCGCATCATA
CGCGCCATGG CCTCGAACCT GCGCTCCGCG CTGACCTACG CTCCCGGCCG GATCGGGACC
CGGGCCGTGC TGTCGTTTCA GACCTGA
 
Protein sequence
MSDESPAPAR ILYIDDDPGL GRLVQRSLQA RGLSVELAAS GEEGLVRAQA GGFDLIALDH 
HMPGQTGLDL LPELRSLPEA PPVIYVTGSE DSRVAVAALK AGAVDYVWKD VQGQFRELLG
EAVDTALRQE ALRRDKERAE AAVREARDRA ELLLREVNHR VANSLTLVAA LARMQTNAVA
DPAAKQALEE MQARISAIAG IHRRLYTSQD VEAVELDAYL AGLVEELQLA MKASGRDHAI
RLQAAPIRLA TDKAVSLGVV VTELVTNAYK YAYPSETQGE IRVQVLCQEP GTLLLTVEDD
GIGWTGDGEA RGTGLGSRII RAMASNLRSA LTYAPGRIGT RAVLSFQT