Gene Mpop_5307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5307 
Symbol 
ID6308722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5673882 
End bp5674313 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content68% 
IMG OID642653989 
Producttol-pal system-associated acyl-CoA thioesterase 
Protein accessionYP_001927935 
Protein GI188584490 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.145182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.895228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAG CGCCCCCAGA GAACGCGCAC CGGCTCCCGG TGCGGATCTA TTACGAGGAC 
ACCGACTTCT CGGGCTTCGT CTACCACGCG AGCTACCTGC GCTTCATGGA GCGCGGGCGC
ACCGAGTTGC TGCGCGCGCT CGCGGGCGAC CAGTCCGAGA TGCACGCCGA GGGCGCCGGC
CTCGTCTTCG TCGTGCGGAA GATGAGCCTT GATTTCCTCA AGCCTGCCCG CATGGACGAC
TGGATCGACG TGCTGACATG GTCGAGCGAG TTGCGGGGAG CCTCGATGCA TCTGACGCAG
GAGGTGCGCC GCGGCGACGA CATCCTGGTT CGGGCCGAAG TCGTGGTCGC CTGCGTCAAG
AACGGGCGGG CGATCCGCCT GCCCGATGCC CTGCGCCGGG CCCTGACGCC ACCGGGCGTC
AGATCCGCCT GA
 
Protein sequence
MTSAPPENAH RLPVRIYYED TDFSGFVYHA SYLRFMERGR TELLRALAGD QSEMHAEGAG 
LVFVVRKMSL DFLKPARMDD WIDVLTWSSE LRGASMHLTQ EVRRGDDILV RAEVVVACVK
NGRAIRLPDA LRRALTPPGV RSA