Gene Mpop_5142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5142 
Symbol 
ID6312786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5507451 
End bp5509112 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content50% 
IMG OID642653825 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001927773 
Protein GI188584328 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGTC GCTCGGCTCT GCGGGTTATT GATTCAACGC TAAGGCACAT CGGCTTTGTC 
CCGACTGGGC CGGGTCCCTG TGACTACGAC GGAACAATCC TAGTTCACGG AAAACCAGTA
TCTGTTGCGA TTTCTATACC TGATGTTCAA TTTGTGCAAA AACCACGAAT ACATCTAAAA
GATCGGTCGC AAATACCAGT CGAAACGTTG GCGCACATCG AAGAACAAAC AGGTATTTGC
TACTCGTCAG GCGCCGGATT GCCGCTTGAT ATATATAATC CCGGCCAAGC AATTCTTAGA
GTTTTAGAGG AAGCCAAAAA CACACTCGAG CTCTCGTACG GAGGGCGTGG TCAAGCAGAA
CTGATCGATG AATATCAGCA TTATTGGAGG TCAACCCTTC CAGCTCGATG TTTCATCGCG
CGGTCGTCGC TTTCAGTAAA ATCAAATGCC TACACTTTTA TAGCCTGTGA AGGCAGTACG
CCGAAATTCC TCGCTCTAGC GGCTGCAAGT ACGCTACGAG GTTACGAAGC AAAGGCGACT
AGACCGGCTA AGATCTGGCG ACTAGATGGC CGATTAGGAC CGGCAGGTAG CATGTTCGCT
CCATCGACAC TTGCTGATTT GAAGATTTGG TTTCACTCAC AACCAGAACT GAAACATGAA
CTTTGGGACG AGGCGTTCCA AATCCTGCTC GATGGTCAAA TGTTGTTCCT TGCGGGGATC
AACGCTCTTC TTGGAATAGA TATGAATATT CCGAAACCTA TAACGCATGC CGTCGGCAGG
AAAGCTATCC GAAAACGAGC GATGTCACGT GTCATAAGCA GCATGGACAA AAAAGTAACG
GTAGAGAGGT ATGCAGGGAA ATGGTCGAGC ATGACAGACG TAGCCGCAAG GAATAATCCC
AGAGATCGAT CTTTCTCAGA CATTTCTGTT GCAGTGATTG GATGCGGTAC GATCGGAAGC
CATTTAGCGC GGATGATCGC CCAGTGCGGA GCGGGCAGTT CATCTCGCTT CACCTTATTC
GACCCTGATA TACTGACTGA AGGAAACATA GGCCGCCACT TACTTGGCTT AGATTCCATC
GGACAAAACA AGGCGCACGC TACCGCAGAA AATGTAAAGC GCTTTCATCC TGGGCTGGAT
GTCTTTTCCT ATGAGGCTAA CGCGTTAGAC TATGCAGGTC TTTTGGGTAG GCATGAACTA
GTGATCGATG CGACTGGTGA GTGGAATGTG CAGTGCGCGC TTAACGATTG GTTTCTCCAA
GACAAACAAT CCAAAACGCG CGCAGTTCTT CACTCATGGG TATTCATGAA CGGAGCTTCC
GTTCAGAGTT TTCTAAATCT TAAAGACCAG TTTGCGTGCT TTAGGTGCCT CAAGCCTTCA
TTCAACGGTC AGTGGCGTTA TCCAGCTGGC GATGAAAGGG AGCCTCTGAA TCTTCGGCCT
GCAACCTGTG GCGATGGATC GTTTGTTCCC TTCACAGTGG ATACATCTGT GATGGCAGCA
TCCCTAGCGA CCAGGGCTGG CTTAGATTGG ATCAACAATA ATCCGGGACC GCGACTTCGC
ACTATCGTTG TCGATTATCA ACGTGGGCGT GAGCAGAAAC CACGAACCCC TGCTCCTTCT
CCTACCTGCC CGGCCTGCTC AACAATCAGG CCTTTTCAAT GA
 
Protein sequence
MDRRSALRVI DSTLRHIGFV PTGPGPCDYD GTILVHGKPV SVAISIPDVQ FVQKPRIHLK 
DRSQIPVETL AHIEEQTGIC YSSGAGLPLD IYNPGQAILR VLEEAKNTLE LSYGGRGQAE
LIDEYQHYWR STLPARCFIA RSSLSVKSNA YTFIACEGST PKFLALAAAS TLRGYEAKAT
RPAKIWRLDG RLGPAGSMFA PSTLADLKIW FHSQPELKHE LWDEAFQILL DGQMLFLAGI
NALLGIDMNI PKPITHAVGR KAIRKRAMSR VISSMDKKVT VERYAGKWSS MTDVAARNNP
RDRSFSDISV AVIGCGTIGS HLARMIAQCG AGSSSRFTLF DPDILTEGNI GRHLLGLDSI
GQNKAHATAE NVKRFHPGLD VFSYEANALD YAGLLGRHEL VIDATGEWNV QCALNDWFLQ
DKQSKTRAVL HSWVFMNGAS VQSFLNLKDQ FACFRCLKPS FNGQWRYPAG DEREPLNLRP
ATCGDGSFVP FTVDTSVMAA SLATRAGLDW INNNPGPRLR TIVVDYQRGR EQKPRTPAPS
PTCPACSTIR PFQ