| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5127 |
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| Symbol | |
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| ID | 6312539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5491491 |
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| End bp | 5494622 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642653809 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_001927758 |
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| Protein GI | 188584313 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.20146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGT CGATCTTCGT GGACCGCCCC CGGCTCGCGC TCGTCATCGC GCTGATCATC
ACGATTGCCG GGGGGCTGGC GCTGCTTCGG ATCCCGGTGG CGCAGTTTCC GGACATCGTG
CCGCCGCAGG TGAGCGTCAC GGGGACCTAT CCGGGCGCCT CGGCCGAGGT CGTCGAGGCG
AGCGTTGCCC AGCCGCTCGA GGCGCAGATC ATCGGCGTCG ACCGCATGAT CTACATGAAA
TCCACGAGTG CCAATGACGG CAGCTATAGC CTTTCGGTGA GTTTCGATCT CGGCACGGAC
CCGGATATCA ACACGGTCAG CGTCAACAAC CGCGTCCAGT CGGCCTTGTC CCAGCTGCCC
TCCGAGGTGC AGCTGCAGGG GCTCAAGGTG CAGAAGAAGT CTTCCGCGAT CCTGCTCTTC
GCGGTGCTCT ACAGCGAGAC GGGCGCGCAG GACCCGCTCT TCATCACGAA CTACGCCATC
ATCAACGTGC TCGACGAGAT TTCGCGCACC GCCGGGGTAG GCCAAGCCAA CCTGTTCGCG
CGAATGAACT ACTCGATGCG CATCTGGTTC GACACGCAGC GCCTGACGAG CCTGAAGCTC
GCGCCCTCGG ATGTGGTGGA CGCGATCCGG GCGCAGAGCG TGCAGGCGCC GGTCGGCCGG
ATCGGCGCAC CGCCGATCAC GGACGAGCAG CAGATCCAGA TGAACGTGCA GACGCAGGGT
CGTTTATCGA CGCCTGCCCA GTTCGGCGCG ATCGTCCTGC GAACGAATTC CGACGGCTCC
GTGGTTCGGA TCCGCGACGT CGCCCAAGTG GAGCTCAGTG CGCAGAGCTT CGACAGCGAG
TCCCGGCTCG ACGGCCGCCC CGGTGTCCCG GTAGCGATCT ATCTCGTACC GGGCGCCAAT
GCGGTGCGGA CCGCGACCGC CGTGAAGGCG ACGCTCGAAA AGCTTTCGAC GCGCTTCCCG
GCAGGCTTGC GGTACGTGGT CGTGCACGAT TCCACGACCT TCGTGAAGGA CACCATCTCC
GAGGTGCTGC GGACGCTGGC TGAGGCCTTC GTCCTCGTCG TCATCGTCGT GTTCCTGTTC
CTGGGAAATC TCCGGGCGAC GGTGATCCCG GCGGTCGCCG TGCCGGTCAG CCTCATCGGT
ACCTTCGCGG TGCTGCTCGT GCTGGGCTAT TCGGCGAACA CCGTCTCGCT CCTGGCGATG
GTGCTGGCCA TCGGCATCGT GGTCGACGAC GCCATCGTCG TCGTCGAGAA TGTCGAGCGG
GTGATGGAGG AGCATCCGGA ACTGTCGCCG GCCGACGCGA CGAAGCTCGC CATGACGCAG
ATCACGGCTC CCATCATCGC CATCACGCTC GTCCTCCTGT CCGTCTTCGT TCCGATCGCC
TTCATCCCAG GCGTGTCGGG AACGCTGTTT CGCCAGTTCG CCGTGACGAT CAGCGCCGCC
ATGATGATCT CGGCGATCAA CGCGCTGACC CTGTCGCCCG CGCTCTGCGG GGTCTTCCTG
CGTCCCACGG GCGCGCGGCG CGGCATCATG GGCCGGGTGC TCGGCGGGAT CGACTGGGTG
CGCGACCGCT ACGCATCAGG GGTCCGCCGC CTCGTCCGCG TGTCCGCGCT CTCGCTCATG
ATGGTTCTCC TGTTCGCGGG CGGCATCTTC GGCCTTTCCC GAGTCACGCC GGTCGGCTTC
CTCCCGGAGG AGGATCAGGG CGCCTTCTTC GTCTCGGTGC AGCTACCCGA CGGTGCCTCG
GTGGCCCGCA CGAGTACCGT CGCGGCAGAG GTCGAGAGGC TCCTGAAGGA CATGCCCGGC
GTCAACCAAG TGCTGTCGGT TATTGGCTTC TCGCTGTTGG ACGGGGCGGC GGAGCCGAAC
GCCGCATTCC TTGTGGCGCA ACTCAAGCCC TTCGCCGAGC GCCGAAGCGC CGCGGAATCC
GCCCAGGCCC TGATCGCGCG CACAAATGCG GCGGCGGCAG GGATCGGGCA AGCGACGGTG
CGGCCCTTCA ACCTTCCGCC CATCGTCGGA CTCTCGACGA GCGGCGGCTT CGAATACGTG
CTCGAGGCAT ACGAGGGCCA GGACCCGGCC GCGATCGACG CGGTCGTGCG CGGCCTCACC
GCGGCGGCGA ACCGCGATCC GCAACTCGCC CGTGTCTTCT CCACCTTCAC GGCGTCGAAT
CCGTCGATCT ACCTCGACAT CGACCGCACG AAGGCACAAG TGCTCGGACT GGCGATGAGC
GACATCTTCG CTTCGCTCCA GGCCACCCTC GGCGGGATCT ACGTCAACAA TTTCAATCTC
TACGGCCGCA CCTGGCAGGT GAACGTGGAG GGCGAGGCGG ACAACCGGGG CGATATTCGC
GACATCTGGA ACATCTATGT CCGCGGCGCC TCGGGCCAGA TGGTGCCGCT GCGTTCGGTG
GCGAGCGAGC GCTTCGTGCT CGGACCGCAG GTGCTGACCC GCTACAACAA TTTCCGGGCT
GTCAGCGTGA ACGGCAGCCC GGCGCCCGGG ATCTCCTCCG GCACCGCACT GGCCGCGATG
GAGCAGATTT CCGACCGTAC CCTGCCGACA GGCTACGGCT ACGAGTGGAC CGGAACCGCC
TATCAGGAGC AGCAGGCGTC CGGACAGACC TGGATCGTCC TCGGCCTCGC CTTCCTGTTC
GCCTATCTGT TTCTGGTCGC CCTCTACGAG AGCTGGACGA TCCCCATTCC GGTCCTTCTG
TCCGTCGTGG TCGGCGCCTT CGGCTCCTAC CTTGCCGTCA AGCTCGCCGG CCTTTCCCTC
GACCTCTACA GCGAGATCGG GCTCGTGGTG CTGATCGCGC TGGCGGCCAA GAACGGCATC
CTGATCGTCG AGTTCGCGAA GGATCAGCGC GAGGCGGGCG TGCCGATCCG GGAGGCCGCG
ATCCGCGGCG CCGAGCAGCG GTTCCGCGCC GTGATGATGA CCTCCATCGC CTTCATCCTC
GGCCTCGTGC CCCTCGTGAT CGCCACCGGC GCGGCCCAGA TCAGCCGTCG CGACGTCGGC
ACCGCGGTCT TCGGCGGAAT GATCGCGGCG AGTTCGATCG GCATCTTCCT GGTGCCGATG
CTCTACGTCA CGGTCCAGTC TCTGCGAGAG CGCGTGAGAT CCGGGAAGAC GAGACAGGGG
CAGACCGCCT GA
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| Protein sequence | MISSIFVDRP RLALVIALII TIAGGLALLR IPVAQFPDIV PPQVSVTGTY PGASAEVVEA
SVAQPLEAQI IGVDRMIYMK STSANDGSYS LSVSFDLGTD PDINTVSVNN RVQSALSQLP
SEVQLQGLKV QKKSSAILLF AVLYSETGAQ DPLFITNYAI INVLDEISRT AGVGQANLFA
RMNYSMRIWF DTQRLTSLKL APSDVVDAIR AQSVQAPVGR IGAPPITDEQ QIQMNVQTQG
RLSTPAQFGA IVLRTNSDGS VVRIRDVAQV ELSAQSFDSE SRLDGRPGVP VAIYLVPGAN
AVRTATAVKA TLEKLSTRFP AGLRYVVVHD STTFVKDTIS EVLRTLAEAF VLVVIVVFLF
LGNLRATVIP AVAVPVSLIG TFAVLLVLGY SANTVSLLAM VLAIGIVVDD AIVVVENVER
VMEEHPELSP ADATKLAMTQ ITAPIIAITL VLLSVFVPIA FIPGVSGTLF RQFAVTISAA
MMISAINALT LSPALCGVFL RPTGARRGIM GRVLGGIDWV RDRYASGVRR LVRVSALSLM
MVLLFAGGIF GLSRVTPVGF LPEEDQGAFF VSVQLPDGAS VARTSTVAAE VERLLKDMPG
VNQVLSVIGF SLLDGAAEPN AAFLVAQLKP FAERRSAAES AQALIARTNA AAAGIGQATV
RPFNLPPIVG LSTSGGFEYV LEAYEGQDPA AIDAVVRGLT AAANRDPQLA RVFSTFTASN
PSIYLDIDRT KAQVLGLAMS DIFASLQATL GGIYVNNFNL YGRTWQVNVE GEADNRGDIR
DIWNIYVRGA SGQMVPLRSV ASERFVLGPQ VLTRYNNFRA VSVNGSPAPG ISSGTALAAM
EQISDRTLPT GYGYEWTGTA YQEQQASGQT WIVLGLAFLF AYLFLVALYE SWTIPIPVLL
SVVVGAFGSY LAVKLAGLSL DLYSEIGLVV LIALAAKNGI LIVEFAKDQR EAGVPIREAA
IRGAEQRFRA VMMTSIAFIL GLVPLVIATG AAQISRRDVG TAVFGGMIAA SSIGIFLVPM
LYVTVQSLRE RVRSGKTRQG QTA
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