Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_5109 |
Symbol | |
ID | 6312457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 5472410 |
End bp | 5473003 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642653791 |
Product | PAS fold-3 domain protein |
Protein accession | YP_001927740 |
Protein GI | 188584295 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.924849 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTATC ACTCGAGGCA ATTTTGGCTC GACTTCCTTC CTGACGCCTT GATCGCCTCC CAGGTCGGCA TCTGGGAAAC AGATTTCGAG AACGACCGCA CCGTCGCCGA TGCAACCACC GCCGCGCTGT TTGGCGTCGA TCCGGTGCAG GCTGCTCTCG GTCTGCCACT TGCCGCTTAC GCCGAGGCGA TCTTCCCGGC CGACCAGGCG GCGTTCTTCA GCAATATCGA TCGCGTCTGT GAGCATGGCG GATTGTTCGT CGTGGAATAT CGCGTGCGCT CTCTGGCGAA CGGCGTGCGC TGGGTCTTGG CGCGGGGGCA TTACCAGCGC GACGAGCGCA CCGGCGGCGT CCTCGGACGC GGCATCGTCG TCGACATCAC CGAGAGCAAG CGGAGCGGGC AGGCGGACGA CCGCGCGCTC TTCGTCCTGC AGGAGCGGGA CGAGACGCCG CTCGATCACA TCGCCACCTG CGCTCTCCAG GCGCGGGGGG CGATCAACGG CGTGGCCGAA CACGAGAAGC CGGCCTTGCA GTCCGCCGTC GATGGGCTGC TCTGGGCGGT CGGGCGTGCG CTGGCCAAGC GCAACCTCTT CTAG
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Protein sequence | MPYHSRQFWL DFLPDALIAS QVGIWETDFE NDRTVADATT AALFGVDPVQ AALGLPLAAY AEAIFPADQA AFFSNIDRVC EHGGLFVVEY RVRSLANGVR WVLARGHYQR DERTGGVLGR GIVVDITESK RSGQADDRAL FVLQERDETP LDHIATCALQ ARGAINGVAE HEKPALQSAV DGLLWAVGRA LAKRNLF
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