Gene Mpop_5109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5109 
Symbol 
ID6312457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5472410 
End bp5473003 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content66% 
IMG OID642653791 
ProductPAS fold-3 domain protein 
Protein accessionYP_001927740 
Protein GI188584295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.924849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTATC ACTCGAGGCA ATTTTGGCTC GACTTCCTTC CTGACGCCTT GATCGCCTCC 
CAGGTCGGCA TCTGGGAAAC AGATTTCGAG AACGACCGCA CCGTCGCCGA TGCAACCACC
GCCGCGCTGT TTGGCGTCGA TCCGGTGCAG GCTGCTCTCG GTCTGCCACT TGCCGCTTAC
GCCGAGGCGA TCTTCCCGGC CGACCAGGCG GCGTTCTTCA GCAATATCGA TCGCGTCTGT
GAGCATGGCG GATTGTTCGT CGTGGAATAT CGCGTGCGCT CTCTGGCGAA CGGCGTGCGC
TGGGTCTTGG CGCGGGGGCA TTACCAGCGC GACGAGCGCA CCGGCGGCGT CCTCGGACGC
GGCATCGTCG TCGACATCAC CGAGAGCAAG CGGAGCGGGC AGGCGGACGA CCGCGCGCTC
TTCGTCCTGC AGGAGCGGGA CGAGACGCCG CTCGATCACA TCGCCACCTG CGCTCTCCAG
GCGCGGGGGG CGATCAACGG CGTGGCCGAA CACGAGAAGC CGGCCTTGCA GTCCGCCGTC
GATGGGCTGC TCTGGGCGGT CGGGCGTGCG CTGGCCAAGC GCAACCTCTT CTAG
 
Protein sequence
MPYHSRQFWL DFLPDALIAS QVGIWETDFE NDRTVADATT AALFGVDPVQ AALGLPLAAY 
AEAIFPADQA AFFSNIDRVC EHGGLFVVEY RVRSLANGVR WVLARGHYQR DERTGGVLGR
GIVVDITESK RSGQADDRAL FVLQERDETP LDHIATCALQ ARGAINGVAE HEKPALQSAV
DGLLWAVGRA LAKRNLF