Gene Mpop_5058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5058 
Symbol 
ID6313253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5421393 
End bp5422679 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content72% 
IMG OID642653740 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_001927689 
Protein GI188584244 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.169093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC CGCGCTCCTC CTCCACCCAC GACGCCCAGG GACGTCCGCT CGTCGCGGTG 
ACGGGTCTCG GCATCGTCAC CTCGCTCGGC CGCGGCGTCG CCGAGAACTG GGACGCGCTG
ACCGCCGGCC GCTCCGGCAT CCGCGCCATC TCCCGCTTCC CCACCGAGGG CCTGCGGACC
CGGATCGCCG GCACCGTCGA TTTTCTCGAC ACCGACCCGC TGGTGGCGCC GCTCCTGTCG
GAGCGCTTCG CCATGGTGGT GGCGGAGGAG GCCGTGACCC AGGCCGGGAT CGGCGCGGGC
TTTCCCGGCG GGCTGTTCGT GGCGGTGCCG CCGGTCGAGA TGGAATGGCC GCAGCGCCAG
GCCCTGGCGG AGGCCGCGGG CGAGCCGGAG GCGGTGACCT ATGCCGGCCT CCAGCAGGCC
GCCGCGACCC GCCGCTTCGA CGCGTGGCAC GACCTGTTCA TCTTCGGTAC GGTGGCCGAC
CGGCTCGCCG ACCGCTTCGG CACCCGCGGC TCGCCGATCT CGCTCTCCAC CGCCTGCTCG
TCGGGCGCCA CCGCGATCCA ACTTGGCGTC GAGGCGATCC GCCGGGGCGA GATGGACGCC
GCGCTGTGCA TCGGCACCGA CGGCTCGGTG AACCCGGAAT CGCTGATCCG CTTCTCGCTG
CTCTCGGCGC TCTCGACCCA GAACGACCCG CCGGAGGGTG CCTCGAAGCC GTTCTCGAAG
AATCGGGACG GCTTCGTCAT GGGCGAGGGC GCCGCCGCCC TGGTCTTGGA AAGCGCCGAA
TCCGCCAGGT CGCGTGGGGC GAAAATCCTC GGCTACGTGC TCGGCTGCGG CGAGAAGGGC
GACGGCTTCC ATCGCACCCG CTCCAGCCCG GACGGCGCAC CGGTCATCGC GGCAATGCGC
GCGGCGCTGG ACGATGCGGG CGTCGCGCCC GAGGCGATCG ACCATGTCAA CGCGCACGGC
ACCTCGACGC CGGAGAACGA CAAGATGGAG GCGCTCGGCT GCTCGGCGGT GTTCGGCGAG
CGGATCGGGA GCCTGCCGAT CTCCTCCAAC AAGTCGATGA TCGGCCATAC GCTCACCGCG
GCCGGGGCCA TCGAAGCGGT GGTTTCGCTG CTGACGATCC GGCACGGGCG CATCCCGCCG
ACGATCAACT ACGCCCTGCC CGACCCGGCA CTGCTGCTCG ACGTGGTCGG GACCGCCCGC
GACGCCCGCG TCGCACGGGT GCTGTCGAAT TCCTTCGGCT TCGGCGGGCA GAACACCTGC
CTCGTCCTGG GAGACGAGCC GGCATGA
 
Protein sequence
MAEPRSSSTH DAQGRPLVAV TGLGIVTSLG RGVAENWDAL TAGRSGIRAI SRFPTEGLRT 
RIAGTVDFLD TDPLVAPLLS ERFAMVVAEE AVTQAGIGAG FPGGLFVAVP PVEMEWPQRQ
ALAEAAGEPE AVTYAGLQQA AATRRFDAWH DLFIFGTVAD RLADRFGTRG SPISLSTACS
SGATAIQLGV EAIRRGEMDA ALCIGTDGSV NPESLIRFSL LSALSTQNDP PEGASKPFSK
NRDGFVMGEG AAALVLESAE SARSRGAKIL GYVLGCGEKG DGFHRTRSSP DGAPVIAAMR
AALDDAGVAP EAIDHVNAHG TSTPENDKME ALGCSAVFGE RIGSLPISSN KSMIGHTLTA
AGAIEAVVSL LTIRHGRIPP TINYALPDPA LLLDVVGTAR DARVARVLSN SFGFGGQNTC
LVLGDEPA