| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5006 |
|---|
| Symbol | |
|---|
| ID | 6313782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 5357654 |
|---|
| End bp | 5358562 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642653687 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001927637 |
|---|
| Protein GI | 188584192 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.396186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.238129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGGC TTCAGGGGAT GCGGGTGTTC GTGCGGGTCG CCGAGAGCGG CGGCTTCGCC
GGCGCGGCCC GGGCGCTCAA CATGAGCCCG CCCGCGGTGA CGCGGGCGGT GGCGGCGCTC
GAAGCCGCCA TCGGCGCGCG GCTCCTCATC CGCACCACCC GCTCGGTGAA GCTCACCGAG
GCGGGTGCCC GCTATCTCGA GGATTGCCGC CGGATCTTTT CGGAGCTTGC TGAGGCCGAG
GCCGCTGCGG CCGGCTCGAC CGCCACGCCC ACCGGCACCC TGACGCTGAC GGCTCCCGTG
CAGTTCGGGC GGCTCTACGT GTTGCCCGTG GTGACCGACT ACCTCACCCA CCATTCCGCG
GTGGCCGTGC GGACGCTGTT CCTCGATCGG ATCGTCAACA TGGTCGAGGA GGGCATCGAT
GTCGGTGTGC GGATCGGACA CCTCGCCGAT TCCGGGCTCA CCGCGGTCCG GGTCGGCAGC
GTGCGCCGGG TCGTGTGCGC GGCGCCGCGC TATCTGGAGC GGCACGGCAT GCCGACGGCC
CCGCGCGACC TGCGCGCGCA TACGGTGATC GGCTCATCGA ACCCCGGCAG CCTGTCGGAA
TGGCGGTTCG GGCGCGAGCA GCGGACCGCC GTTGCCGTCC AGCCCCGGCT CACCTGCAAC
ACCGTGGATG CGGCGCTCGC CGCGGCCGTG GAGGGCTGGG GGATCGCGCG GCTCCTGTCC
TATCAGGTCG CGCCCGCCCT GGCCGATGGC CGCCTGCGCT TGCTGCTCGA GGAGCACGAG
GCGGCGCCCG TTCCGATCCA CGTCGTGAGC CCGGAAGGGC GGCGGGCCCC GGCCAAGGTG
CGGGCCTTCG TCGATCTCGC CGCGACGCGG CTGCGGGCCG ACCTGCGGGT GAACCCGGCC
GCCGCGTGA
|
|---|
| Protein sequence | MDRLQGMRVF VRVAESGGFA GAARALNMSP PAVTRAVAAL EAAIGARLLI RTTRSVKLTE
AGARYLEDCR RIFSELAEAE AAAAGSTATP TGTLTLTAPV QFGRLYVLPV VTDYLTHHSA
VAVRTLFLDR IVNMVEEGID VGVRIGHLAD SGLTAVRVGS VRRVVCAAPR YLERHGMPTA
PRDLRAHTVI GSSNPGSLSE WRFGREQRTA VAVQPRLTCN TVDAALAAAV EGWGIARLLS
YQVAPALADG RLRLLLEEHE AAPVPIHVVS PEGRRAPAKV RAFVDLAATR LRADLRVNPA
AA
|
|---|
| |