| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4974 |
|---|
| Symbol | |
|---|
| ID | 6311430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 5322979 |
|---|
| End bp | 5324211 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 642653655 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001927605 |
|---|
| Protein GI | 188584160 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.743328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0685373 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGG AGGAGAAGGG CGGCGCCGCC CGCAAGGCGG CGGGGGCGAA ATCCGCCAGC
GGCTACTTCC TCGATCCGGA CCGCCGGCCG GCGGCGGCCT TCGCATTCGG GATCGGCTGC
CTCCTGCTGG CGCTCCACCA TGCCGGGCTG TCGCGCCTCA CCCCCGCCTA TCTCGCCGCC
TGGACCTGCC TCCTGGCCCT GCCGGCAGGG GCGCTGCCCG TCGTCATCAT GATCGAGCGC
GCGGATGCGT GGCGTCCGCA GCCGGAGACC GCCCTGCTGG AGACCCTGCG CGGCCTGCTG
GTGCTGATGC CGGTGGCGGC ACTCCTCGCC CTGCCGATCC CGTTGGCCGC CCCCCTGCTC
TACGCGGGCC CGGGAAGCGC CGGACCGGAC GGGCCGCTCG CCCTGTTCGG GGCCGCGCCG
CCGTTCCTCG CCCTCCGTCT CGGCCTCTAC TTCGCCCTCT GGACCGGGCT CGCCCTGCTC
TTCGCCCGCC GCGGCGGCGA GCCCTGGGCC AAGGCCGGCC GCATCGACGA CGGGCGCGCC
GTGCTCGGCC TGGGACTCCA CACCGTGGTC GGCACGCTGG CCGCGGGCGA CCTCGTGATG
TCGGTGGGCA CGAACCCGGC GCTGCGCTTT CACGCCAGCG CCTTCGGCCT GCTGACGCTG
GCGGCGTGGT CGAGCCTCGC GCTCGCCGCC GCGATCCTCG TCGCACCCCC CGATGTCGGG
CCGGCCCGGC GCCGCCACGA CCGCCTGACT CCGCTCGCCG TGCTGCTCCT CGTCTGGGCC
GGCCTACACC TCGTGCAGTT CCTGATGCTC GGCGCCGCCG CCGATCCGGA GGCCGCCGCG
TGGTACCGGC TGCGCTCAGG GAGCGCCGGC CGCGCCCTGG CCCTGTCGGC CGCCGCGGTG
GTCGCGCTCG CCGCCGTCCT GACCCTGCGC CCCGGCGAGA ACCGCACGCG GCTCGTGGCG
GCCTTCGCGG TCGCGATCCA CCTTGCCGAG CTGTTCTGGT TCGTCACCCC GGCATTCCGC
GGCAGCTTCC GTATCGGGCT CACCGACGTC CTGGCGCTGG CCGGCCTCGT CGGGCTGGCC
ATGGGGCTGG CACCGGTCGT CCGGCGCTTG GTTCCGGGGC TGGCCGTGAC CCCCGCATGG
CCGGGCCGCG AGCGCGCGCG GTCGGGTGCG ACGGGTTTGG TGGCGGGGGA CAGGGGACGC
AAGCCGGTTG TTCGCCCCCC CGAAGCTTCC TAG
|
|---|
| Protein sequence | MSAEEKGGAA RKAAGAKSAS GYFLDPDRRP AAAFAFGIGC LLLALHHAGL SRLTPAYLAA
WTCLLALPAG ALPVVIMIER ADAWRPQPET ALLETLRGLL VLMPVAALLA LPIPLAAPLL
YAGPGSAGPD GPLALFGAAP PFLALRLGLY FALWTGLALL FARRGGEPWA KAGRIDDGRA
VLGLGLHTVV GTLAAGDLVM SVGTNPALRF HASAFGLLTL AAWSSLALAA AILVAPPDVG
PARRRHDRLT PLAVLLLVWA GLHLVQFLML GAAADPEAAA WYRLRSGSAG RALALSAAAV
VALAAVLTLR PGENRTRLVA AFAVAIHLAE LFWFVTPAFR GSFRIGLTDV LALAGLVGLA
MGLAPVVRRL VPGLAVTPAW PGRERARSGA TGLVAGDRGR KPVVRPPEAS
|
|---|
| |