| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4951 |
|---|
| Symbol | |
|---|
| ID | 6311116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 5288606 |
|---|
| End bp | 5289385 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642653632 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_001927582 |
|---|
| Protein GI | 188584137 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.527088 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCTCA GACGCCCCCC TCCGATCACC CCCGAGCCGG GCCCGAACGC GAAGAAGATC
GTGAGCTGGA ATCTGCTGCG CCGCACCGGC GCGGCGGTGG ATTGCCTCGT CACGCTGATC
GAGCAGGAGC GTCCCGACCT GCTGCTGATG CAGGAGGCAA CGAAGGAGAT CGCCGCCCTG
AAGGACCGGG TCGGCGGCGT CTATGCCTGG GCGCAACTGC CGGGGCGCAT CCACGGACTG
GCGATGTGGA GCCCGATTCC CTGGGCCAAG CCGCCGGAGA TCGTCACCCT GCCCCCGGGC
GTGCTGATCG ACCGGGTCTG CCAAGTGCTC GACTGGGGCG AATTCGGCGT CGCCAACGTC
CACCTCTCGC ACGGGCAGGT GCTGAACCGG CGCCAGCTCC GGCGCATCGA GAGCCATCTG
CCGGTCCGCG CCGCGGTGCT CGGCGACTAC AACATCGTCG GCCCGGCCCT GCTGCCGGGC
TTTCGCGATG TCGGCCCGCG CCGTCCGACC CACGCCATGG TCGACGTGCT GCCGCTGCGG
CTCGACCGCT GCCTCGTGCG CGGCCTCGTC TGCCACGAGC GCATGGTCCT GCCCCGCGGG
CTGTCCGATC ACCATCCGAT CGTGGTGCGG CTCTCGCCCG CGCCGGAGGG CGTCGCCTCG
GTGGGGCGTC TCAGAGGTAT GGCAGAAGCA GTCGGACGGC TGCGTCGCGC AAACGTACGG
GGAGCGCGCG CGCGTCGAGA TCGGCCTGGG TCAGACGGGT CCGCCGCTTC CCCGCGATGA
|
|---|
| Protein sequence | MLLRRPPPIT PEPGPNAKKI VSWNLLRRTG AAVDCLVTLI EQERPDLLLM QEATKEIAAL
KDRVGGVYAW AQLPGRIHGL AMWSPIPWAK PPEIVTLPPG VLIDRVCQVL DWGEFGVANV
HLSHGQVLNR RQLRRIESHL PVRAAVLGDY NIVGPALLPG FRDVGPRRPT HAMVDVLPLR
LDRCLVRGLV CHERMVLPRG LSDHHPIVVR LSPAPEGVAS VGRLRGMAEA VGRLRRANVR
GARARRDRPG SDGSAASPR
|
|---|
| |