Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4686 |
Symbol | |
ID | 6313295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 5003626 |
End bp | 5005422 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 642653364 |
Product | glycosyl transferase family 39 |
Protein accession | YP_001927317 |
Protein GI | 188583872 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.938839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCC TCAGTGCCGG TCCGTCCGCG CCCGTGCGCA TGGACCTTTC TCGACCGCTC GGCGGTGCCG TGACGCTCGC GGACCGGGTG CTGGGCTTCG GTGCGGCGAG CCATGTCCGG GCCTGCCTGC TGCTCCTGCT GATCGGCCTC GCGAGCTTTC TGCCGGGCCT TGCCTCGCTC CAACCGATGG ACCGGGACGA GCCGCGCTTC GCGCAGGCCT CCAAGCAGAT GCTGGAGACG GGCGACCTCG TCGATATCCG CTTCCAGGCG GAGGCGCGCC ACAAGAAGCC GGTCGGCATC TACTGGGCGC AGGCCGCCGC GGTCGCGGCC GGCGAGGCGC TCGGCGTGCC GCGCGCCCGC ACGCAGATCG GGCTCTACCG GATCCCCTCG CTCGTCGGCG CGCTGGCGGC GATCCTCCTG ACCTACTGGG CCGCTCTCGC CCTGCTCGAC CGGCGCCGGG CGCTGCTCGC TGCGGCTTTG TTTTCCGCCT GCATCATGCT CTCGGCGGAA GCGCGGCTCG CCAAGACCGA CGCGCTGCTC ACCGCCTGCT CGGTCGCCGC CTTCGGCGCG CTCGCCCGCG CCTGGCTCGG GCGCGCCCGG CTGGAGCGGC GGCGCGGCCC GGCCTCTCTC GGAACGGCTC TGGTCTTCTG GCTCGGCATC GCCCTCGGCA TCCTCGTGAA GGGGCCGATG GTGCCGCTGT TTGCCGGCCT CACCGCCCTC GTCCTGTGCC TGCGCGAGGG CTCGGCCCGC TGGCTCCTCG ACCTGCGCCC GCGTCTGGGC CTCGTCCTCA CCCTCGCCGT CGTGGCGCCG TGGTTCCTGG CGATCGCCTG GAAGAGCGGC GGCGCCTTCT TCGGCGAGGC GGTGGGGCGC GACATGCTCG GCAAGGTCGG CACCGGCGCC GAGAAGCACT GGGGCCCGCC CGGCGCCTAC GCGCTCGCCT TCTTCGCCAC GTTCTGGCCG GGCGCGGCCT TCGCCGCCCT CGCCATTCCC TTCGCCTGGA GGCAGCGGAG AGAGGAGGCG GTGGCGCTGC TGCTGGCCTG GATCGTGCCG ATGTGGCTGA TCTTCGAGGC AGTGCCGACC AAGCTGCCGC ATTACGTCCT GCCCCTGATG CCGGCGGTGG CGATCCTCAC CGTGCTGGCG CTCACGCGCG GCGCCCTCGA TCCGCGCCGC CCGGGCGCGC GCTGGGTGGC GGGCCTCGTG GTGCTGATCC CGGTCGGGCT CACGCTCGGC CTGAGCCTCG CCGCGTGGCG GCTCGACCAC GCCCTGCCGC TCGCCGCCCT GCCGCTTCTC CTCGCCGCCT GCGGCCTCGC GATCCTCGCC TGGGCCGCCT TCGCTCAAGG GGCCGGGCAG AGGGCCGGGC AGAGGGCCGG GGAGGGCGCC AGAGAGGGGG CTCTCGCCCT CGGCGTCGCC GCCTCGGTGC TGCTGTCGGG GGCCGTGTTC GGCCTGACCC AGCCGGTGCT GCAGAGCCTC AAGGTCTCGC CGCGGCTCGC CGCGATCCGC GACGCCCTGC CCTGCGCGGC GCCGGTTGTG GCGAGCCTGG GTCTTCGCGA GCCGAGCCTC GTCTTCACCA TCGGCACGGA TCTCGCCATG CTGAATTCCG GCGCGGAGGC CGCCGCCTTC CTTCGCGAGG GCGGCTGCCG CCTCGTGCTG GTCGAGGACC GGTTCGCCGC CGAATTCGCC GCCGCGGAAG GCGGACAGCC GCTCAGCCCC GCCGGCCGGG TCACGGGCTT CAACATCAAC GGCGGCAAGC CGGTCGGGGT CTCCGCCTAC GCCGCGCTGC CGGGCGCCAC ACCATGA
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Protein sequence | MTSLSAGPSA PVRMDLSRPL GGAVTLADRV LGFGAASHVR ACLLLLLIGL ASFLPGLASL QPMDRDEPRF AQASKQMLET GDLVDIRFQA EARHKKPVGI YWAQAAAVAA GEALGVPRAR TQIGLYRIPS LVGALAAILL TYWAALALLD RRRALLAAAL FSACIMLSAE ARLAKTDALL TACSVAAFGA LARAWLGRAR LERRRGPASL GTALVFWLGI ALGILVKGPM VPLFAGLTAL VLCLREGSAR WLLDLRPRLG LVLTLAVVAP WFLAIAWKSG GAFFGEAVGR DMLGKVGTGA EKHWGPPGAY ALAFFATFWP GAAFAALAIP FAWRQRREEA VALLLAWIVP MWLIFEAVPT KLPHYVLPLM PAVAILTVLA LTRGALDPRR PGARWVAGLV VLIPVGLTLG LSLAAWRLDH ALPLAALPLL LAACGLAILA WAAFAQGAGQ RAGQRAGEGA REGALALGVA ASVLLSGAVF GLTQPVLQSL KVSPRLAAIR DALPCAAPVV ASLGLREPSL VFTIGTDLAM LNSGAEAAAF LREGGCRLVL VEDRFAAEFA AAEGGQPLSP AGRVTGFNIN GGKPVGVSAY AALPGATP
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