| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4676 |
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| Symbol | |
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| ID | 6314165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4992301 |
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| End bp | 4995903 |
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| Gene Length | 3603 bp |
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| Protein Length | 1200 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642653354 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001927307 |
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| Protein GI | 188583862 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC CCCAACCCAA GCCCCAATCC AAGCCGTCTG CGCCGAAGCC GCAGACCGCG
CGCTTCGCCC TGCCGAAATC GGCGCCGCTG ACCAAGGCGC TCGATGCGAT CCGCCGCGGC
GACAGCCCGA CGCTGGCCTC CGTGCCCGAC GGCTTCGACG CGCTGGTGGC GGCCGACCTC
GCACGCGCCC TGTCGAGCAC CTTCGAGGGG CCGGCGGTGC TGGTCCATGT CGCCCGCGAT
TCGGGGCGTT CCAACGCCTT CCAGAACGCG CTGAAGTTCG TCGCTCCCGA GATCGAGGCG
ATGAGCTTCC CGGCCTGGGA CTGCCAGCCC TACGATCGCG TCTCGCCGAA CGCCGCGATC
GCCGCGCAGC GCATGACCGC GCTCTCGCGG CTGACCCGCT CACGCTCGTC CGAGGAGAAG
CCGCGCATCC TCTGCACCAC GGTGAACGCC CTGGTGCAGC GGGTGCCGCC CCGCGCCCGG
GTCGCGGTCG AAACGTTTTC GGCGGCGATC GGCAACGTGG TGCCGATGGA CAAGGTCGTC
GCCTGGGTCG AGGCCAACGG CTTCCTGCGC ACGGGCACGG TGCGGGATAC CGGCGAATAC
GCCGTGCGCG GCGGCATTCT GGACCTGTCG CCGCCCGGCC TGCCGAACCC GATCCGCCTC
GATTTCTTCG GCGACACCCT CGAATCGATC CGCGCCTTCG ATCCGGAGAC GCAGCGCACG
GTGGGGTCCT TGCGCTCCCT CGACCTCGTG CCGATGAGCG AGGTGCAGCT CACCACCGAG
ACGATCCGGC GCTTCCGCCA GGGCTACCTG TCGAGCTTCG GCGCGGCGAC CCGCGACGAC
CGGCTCTACG AGACGGTGAG CGAGGGACGG CGCTATGCCG GCCTCGAGCA CTGGATGCCG
CTGTTCTACG ACGGCCTCGA CACCCTGTTC GACTATCTCG GCGACGTGCC GATGCTGTTC
GATCCGCAGG TCGAGGAGGC GGCGGCCGAG CGGCTCTCCC TGATTCAGGA CTATTTCCAG
GCCCGCGAGG CGGCGCTGAA GAACCCGCAA TCGGGCGTGG CGCCCTACAA GCCGCTGCCG
CCCCGCGCCC TCTATCTCAC GCCGAACGAG TGGAAGGGGA AGGTCGAGGC CGGCACGGTC
GCCCGGCTCA CCCCCTTCGC GCAGCCGGAT TCGGAGGAGC GCGCCGTGAT CGATTGCGGC
GCCAGGGCCG GCCGCAACTT CGCGCCCGAG CGGGCCGACG AGGCGGCCAG CGTGTTCGAC
GCGGCGGTCG CGCATATCCG CGACCTGCAG GCATCCGGGC ATCACGTGAT CCTGGGATCC
TGGTCCGACG GCTCCCGCGA CCGGCTCTGC GGCGTGCTGA CCGATCACGG CCTGAAAAAA
CCGATCGAGA TCAACAGCTT CACTGCCGTG AACGCGTTGA AGCGCGGCAC CGACGTGGCG
GTGGCGGTCT GGGGGCTTGA GGCGGGCTTC ACCCTTGACA AGCTGGCGGT CGTGGCCGAG
GGCGACATCC TCGGCGACCG GCTGGTTCGC CAGAAGCGCA AGTCGAAGCG CCCGCAGGAC
ATCATCCTGG AGGTGCAGGC GCTCCAGCCC GGTGATCTCG TGGTCCATGC CGACCACGGC
ATCGGCCGCT TCGTCGGCCT CAAGACGGTG ACGGCGGCGG GCGCCCCGCA CGACTGCCTG
GAGCTGCAAT ATGCCGGCGG CCTGCTGCTG CTGCCGGTGG AGAACATCGA GCTTCTGACC
CGCTACGGCT CGGAAGACTC GGAGGTCGCC CTCGACCGCC TCGGCGGCGG GGCGTGGCAG
GCCCGCAAGG CCAAGATGAA GCGCCGCATC CTCGAGATGG CGGGCGAACT CATCAAGGTC
GCCGCCGCCC GCTTCGTGAA GCCCGCGCCC TCGCTCAAGG CGCCGGAAGG CCTGTACGAA
GAATTCGCCG CGCGCTTCGC CTTCCAGGAG ACCGAGGATC AGGCCAACGC CATCGATGCG
GTGCTCGACG ACCTCAATGC GGGGCGGCCG ATGGATCGGC TCGTCTGCGG CGATGTCGGC
TTCGGCAAGA CGGAGGTGGC GCTCCGCGCC GCGTTCGCCG CGGCGATCTC CGGCAAGCAG
GTGGCGGTGG TGGTGCCGAC GACGCTTCTC GCGCGCCAGC ATTACCGGAC GTTTGCCGAG
CGGTTTAAGG GCCTGCCGAT CAACGTGGCG CAGCTCTCCC GCTTCGTCTC CGCCGGCGAT
CAGCGCCAGA CGCGCGCCGG GCTCGCCGAG GGCAAGGTCG ATATCGTCGT CGGCACCCAT
GCGCTGCTGG CCAAGAACGT CGCGTTCAAG GATCTCGGCC TCATCATCGT CGACGAGGAG
CAGCATTTCG GCGTGGCCCA CAAGGAGCGG CTCAAGGCGC TCCAGGCGGA TGTCCACGTG
CTGACGCTCT CGGCGACGCC GATCCCGCGC ACGCTCCAGC TCGCCATGAC GGGCGTGCGC
GAACTCTCGA TCATCGCCAC GCCGCCGGTG GATCGGCTGG CCGTACGCAC CTTCGTGACG
CCGTTCGATC CGCTGCTGAT CCGCGAGGCG CTGCTGCGCG AGCGCTACCG CGGCGGCCAG
GCGTTCTACG TCGTGCCCCG CATCGAGGAT CTGGCCGAGG TCAAGCGCTT CCTCGATCAA
GAGATGCCCG AAGTCACGGT GGCGGTCGCC CACGGCCAGA TGGCGGCGGG GCAGCTCGAG
GACGTGATGA CGGCCTTCTA CGAGGGCAAG TACGACGTGC TGCTCTCGAC CACCATCGTC
GAATCCGGCC TCGACATTCC GACCGCCAAC ACGCTGATCG TGCACCGGGC CGACATGTTC
GGACTGGCCG CGCTCTACCA GCTGCGCGGG CGCGTCGGCC GCTCCAAGGC GCGGGCCTAC
GCGCTGTTCA CCACCCCGGC CAACCGCCAG CTCACGGCCC AGGCCGAGCA GCGGCTCAAG
GTGCTGCAGA GCCTCGACAC GCTGGGCGCC GGCTTCCAGC TGGCCTCCCA CGACCTCGAC
ATCCGCGGCG CCGGCAACCT TCTGGGCGAC GCCCAGTCCG GCCACATCAA GGAAGTGGGC
TACGAACTCT ACCAGCAGAT GCTGGAGGAC GCGGTCACCG CGCTCAAGGC CGGCATTGAG
GAGCCGGTGG AGGAGGCGTG GTCGCCGACC ATCGCGCTCG GCGCCCCCGT CACGATCCCC
GAGGATTACG TCGAGGATCT CACCGTCCGG CTCGGCCTCT ACCGGCGCCT CTCGACGATC
GAGAACGACG CCGAGATGGA GAGCTTCGGC GCCGAGCTGA TCGACCGTTT CGGCCCGCTG
CCGCCGGAGG TGGAGCAGCT CCTCAAGATC GTGACCATCA AGATCCTGTG CCGCGAGGCG
AATGTCGAGA AGGTGGAGGC GGGCCCGAAG GGCGTCGTGG TCCACTTCCG CGACAAGTCC
TTCGCCAACC CGCAGGGGCT CGCCGCGATG GTCGTGGAGC AGGGCTCCTT CGCCAAAGTG
CGGCCGGACA TGAGCGTCGT CTTCATCCGC GAACTCGACG GCATCCCGAA GCGCCTGAAG
GAGACGACGC AGATCATGCG CGGGCTCGTG ACCATCGCCA AACGGGCGAA GAAGGCGGCC
TGA
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| Protein sequence | MAKPQPKPQS KPSAPKPQTA RFALPKSAPL TKALDAIRRG DSPTLASVPD GFDALVAADL
ARALSSTFEG PAVLVHVARD SGRSNAFQNA LKFVAPEIEA MSFPAWDCQP YDRVSPNAAI
AAQRMTALSR LTRSRSSEEK PRILCTTVNA LVQRVPPRAR VAVETFSAAI GNVVPMDKVV
AWVEANGFLR TGTVRDTGEY AVRGGILDLS PPGLPNPIRL DFFGDTLESI RAFDPETQRT
VGSLRSLDLV PMSEVQLTTE TIRRFRQGYL SSFGAATRDD RLYETVSEGR RYAGLEHWMP
LFYDGLDTLF DYLGDVPMLF DPQVEEAAAE RLSLIQDYFQ AREAALKNPQ SGVAPYKPLP
PRALYLTPNE WKGKVEAGTV ARLTPFAQPD SEERAVIDCG ARAGRNFAPE RADEAASVFD
AAVAHIRDLQ ASGHHVILGS WSDGSRDRLC GVLTDHGLKK PIEINSFTAV NALKRGTDVA
VAVWGLEAGF TLDKLAVVAE GDILGDRLVR QKRKSKRPQD IILEVQALQP GDLVVHADHG
IGRFVGLKTV TAAGAPHDCL ELQYAGGLLL LPVENIELLT RYGSEDSEVA LDRLGGGAWQ
ARKAKMKRRI LEMAGELIKV AAARFVKPAP SLKAPEGLYE EFAARFAFQE TEDQANAIDA
VLDDLNAGRP MDRLVCGDVG FGKTEVALRA AFAAAISGKQ VAVVVPTTLL ARQHYRTFAE
RFKGLPINVA QLSRFVSAGD QRQTRAGLAE GKVDIVVGTH ALLAKNVAFK DLGLIIVDEE
QHFGVAHKER LKALQADVHV LTLSATPIPR TLQLAMTGVR ELSIIATPPV DRLAVRTFVT
PFDPLLIREA LLRERYRGGQ AFYVVPRIED LAEVKRFLDQ EMPEVTVAVA HGQMAAGQLE
DVMTAFYEGK YDVLLSTTIV ESGLDIPTAN TLIVHRADMF GLAALYQLRG RVGRSKARAY
ALFTTPANRQ LTAQAEQRLK VLQSLDTLGA GFQLASHDLD IRGAGNLLGD AQSGHIKEVG
YELYQQMLED AVTALKAGIE EPVEEAWSPT IALGAPVTIP EDYVEDLTVR LGLYRRLSTI
ENDAEMESFG AELIDRFGPL PPEVEQLLKI VTIKILCREA NVEKVEAGPK GVVVHFRDKS
FANPQGLAAM VVEQGSFAKV RPDMSVVFIR ELDGIPKRLK ETTQIMRGLV TIAKRAKKAA
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