| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4608 |
|---|
| Symbol | |
|---|
| ID | 6313009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4918861 |
|---|
| End bp | 4920336 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642653287 |
|---|
| Product | Hemolysin-type calcium-binding region |
|---|
| Protein accession | YP_001927240 |
|---|
| Protein GI | 188583795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.912572 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCGG GCCAAACCTA CAGCACCACC CCCATCCGCA CGACGTACGA CGGACAGGTT
ATCGAAAATC TGGATCTCTG GGTCTCCGAC GGCGACGCCA TCCGCGTCGA GAATGACAAC
GTCATCATCC GCAACGTCAC CATCCACCAC GCCGACGGCA ACGGCATCGT CGTCGAGGAT
GCCAGCGGCG TCAGCGTTCA GAACAGCCTT ATCGTCAATT CCGATCCGCC GACGGGCAAC
GGGGGCGAGA CCGATCCGGA GACCACCGGC ATCCGGGTCG TCAACGCGCC GAACTTCACC
GCCTCGCACG TGACGCTGCA GGACAGCGGC ACCGGCATCT ATCTCGGCCA GTCGCCGGGC
GCGAAGCTGT CCTACATCGA GGGCCACGAC TTCCACGGGC CGTTCCCCGG CGGACAGCTC
GTCCAGTTCT TCCAGTCGCC CAACGGCAGC CTGTCGGACT TTTCCGTCAC CAACGATCCG
GACCACTCGC ATGTCGAGGA CAACGTCTCG ATCATCGACA GCCAGAACGT GACGATCGCC
AACGGCGTCA TCGACGGCAA CAACTCGCCG AGCGGGGCCG GCGTGATGTT CGAGGGCAAT
TCGCAAGGTG GTCACGTCCA GAACGTCGAC GTGATCCACA TGAGCAATGG CGGCTTCTCG
TCCTACTCGG ACGACGTCAG CTTCGTCGAC ACCCGCTCCT TCGACAACGA TGCCGGCGAC
CAGGGCCGCG GCGTGTCGCT GTCGAACGGG CTGATCTGGA ACATGACCGG CGACAACGTC
ACGGTCGAGG ATTCGACCTA CACGGATCCG GGGGTTCCCA ACAACATCGT CTGGGGCACG
TCCTCGGCCG GTGCGGACGT CACGGCGGCG CCCTCGGCCA CGCCGATGAC GCCGATCCAC
AACGTGTTCG ACGGGACGGC GACGGGCAGC ACGCCGGTGG CGACCCCGGC CCCGACCCCC
GTTGCGACGA CTCCTGTCGC CACGACTCCT GTCGCCACAC CTCCGGTCGC GACCGCCCCG
GCTGCCAACC CGGCGCCATC GGGCACCGGG ATCGACCGTG ACGGCACCGC CGCCTCGGAG
ACGATGACCG GCTCGCGCTT CGCCGACGAC CTCGACGGGC GGGACGGCAA GGACACGCTC
AACGGGATGG GCGGAGACGA CCGCCTCTAC GGCGGGGCCG GCAACGACCG GCTCGACGGC
GGCAGCGGCA CCGACCACCT CTGGGGCGGC GCCGGCGCGG ACCGGTTCGT GTTCAAGGCC
GGCAACGGCA CCGACTGGGT CGAGGACTTC CAAACCGCCG GCCGCGGGCA CGACGTGGTC
GAGCTGAGCA AGGCGATGTT CAGTTCGTTC AACGCCCTGC TCTCCGCGGC TCACGATGTC
GGTTCCGACG TCGCCATCAC CTCGGGCGCC GATACGCTGT GGCTCGCCGA CGTCCACAAG
GCCGACCTCT CGGCCGGGCA TTTCCTGTTC GTCTGA
|
|---|
| Protein sequence | MPAGQTYSTT PIRTTYDGQV IENLDLWVSD GDAIRVENDN VIIRNVTIHH ADGNGIVVED
ASGVSVQNSL IVNSDPPTGN GGETDPETTG IRVVNAPNFT ASHVTLQDSG TGIYLGQSPG
AKLSYIEGHD FHGPFPGGQL VQFFQSPNGS LSDFSVTNDP DHSHVEDNVS IIDSQNVTIA
NGVIDGNNSP SGAGVMFEGN SQGGHVQNVD VIHMSNGGFS SYSDDVSFVD TRSFDNDAGD
QGRGVSLSNG LIWNMTGDNV TVEDSTYTDP GVPNNIVWGT SSAGADVTAA PSATPMTPIH
NVFDGTATGS TPVATPAPTP VATTPVATTP VATPPVATAP AANPAPSGTG IDRDGTAASE
TMTGSRFADD LDGRDGKDTL NGMGGDDRLY GGAGNDRLDG GSGTDHLWGG AGADRFVFKA
GNGTDWVEDF QTAGRGHDVV ELSKAMFSSF NALLSAAHDV GSDVAITSGA DTLWLADVHK
ADLSAGHFLF V
|
|---|
| |