| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4347 |
|---|
| Symbol | |
|---|
| ID | 6314027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 4631792 |
|---|
| End bp | 4632934 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642653032 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001926986 |
|---|
| Protein GI | 188583541 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.536253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATG CCCCGCCCGA CGCCGCCCCT CAGCCGGCAA GGGACGGTGC CGGGCAAGCG
GGGACGGCGC CCACCGCCCG ACGCCCTGGG TGGGGCCGCC TTAGCGTCGA GATCCGGCAG
CACGCCTCCC CCAGCCTGCA GGCGGCGTCC CTGGCCGGCG GCCTGATCGC CGGGCTCGCC
TGCGCCGCCG CGATCCTCGT CGCGGCGGGG GTCGGCCTGT CGGACCTCGT TCAGGAATTC
ATCGTCTCGA TCGTCACCAG CCCCGAGAGC ATCGCCGCGG TACTGGTCCA GGCGGCGCCG
TTGGCCATCG TCGGGCTTGC GGCGGCCGTC GCCTTCCGCG TCCGCTTCTG GAACATCGGG
ATCGAGGGTC AGATGATCAG CGGGGCCATC GCGGCCACTG CGATCTCCGT CGAGGATATC
GGCCCGCCTT CGCTCCACCT CCCGCTGATG TTCGCCGCCG CCGCGCTCGG CGGCGCCGGA
TGGATCCTCG GCCCGGTCCT GCTACGCCTG CGGATCGGCC TCAACGAGAT CATCTCGACC
CTGCTGCTCA ACTACGTCGC GTTCAACTTC CTGCTCCACC TGCTCTACGG AACGTGGCGC
GACCCGCAGA GCAACTTCCC GAACTCGCAG CTTTTCGACG CCTCAGAGCA ACTGGCCGAA
CTCGGCTGGC AGAACTTGAC CTGGGCTCTG CCGCTGGCCC TGGTGCTCCT CATCGCCGGG
TGGTGGGCGC TCTCGGTCAG CCGCTTCGGC TTCCTCACCC GGATCGCCGA GGCCAACCCG
CGGATGGGGC AGGCGCAGGG GCTACCGATC ACCCGGGTGA TCATTGCGGC GACCCTCGCC
TCGGGGGCGC TCGCCGGGAT CGCCGGTTTC GCGATCTGCG CCGGCACCGA GCACCGCCTC
ACCCAGTCCT TCGCGACGGG CTACGGCTTC TCGGGGATCC TGATCGCGTT CCTAGCGCGT
AACAGCGCGC CGGGCGTGCT CGTCGTCGCG CTCTTCGTCG GCACGCTGTT TGTTGCCGGG
CAAAGCCTTC AGGTCTTCTA CCAGATCCCA GCCTCTACCG TGCAGTTGCT TCAGGCGGTG
ATCGTGCTCT GGGTCGCGGC CTCAGATTTT GTCATCCGCC ACCGCCTGCG CTGGCTCCGG
TAG
|
|---|
| Protein sequence | MIDAPPDAAP QPARDGAGQA GTAPTARRPG WGRLSVEIRQ HASPSLQAAS LAGGLIAGLA
CAAAILVAAG VGLSDLVQEF IVSIVTSPES IAAVLVQAAP LAIVGLAAAV AFRVRFWNIG
IEGQMISGAI AATAISVEDI GPPSLHLPLM FAAAALGGAG WILGPVLLRL RIGLNEIIST
LLLNYVAFNF LLHLLYGTWR DPQSNFPNSQ LFDASEQLAE LGWQNLTWAL PLALVLLIAG
WWALSVSRFG FLTRIAEANP RMGQAQGLPI TRVIIAATLA SGALAGIAGF AICAGTEHRL
TQSFATGYGF SGILIAFLAR NSAPGVLVVA LFVGTLFVAG QSLQVFYQIP ASTVQLLQAV
IVLWVAASDF VIRHRLRWLR
|
|---|
| |