| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3953 |
|---|
| Symbol | |
|---|
| ID | 6312192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4213070 |
|---|
| End bp | 4214044 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642652655 |
|---|
| Product | molybdopterin dehydrogenase FAD-binding |
|---|
| Protein accession | YP_001926615 |
|---|
| Protein GI | 188583170 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.611894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCTT TCGCCTACGA GCGCCCCGCC ACGGTCCAGG ACGCGGCGCG GCTCGCCGCC
GATCGGCCCA ACGCCCGCTT CATCGCCGGC GGCACCAACC TGCTCGATCT GATGAAGCTT
CAGATCGAGA CGCCCGCGAC CCTGATCGAC GTCAACCGCC TGCCGCTCGC CGAGGTGACC
GAGACGGAGG AGGGCGGCCT GCGCATCGGC GCGCTGGTGC GCAATTCCGA TCTCGCCGCG
CATCCGCGGC TTCGGAAGGA CTACGCGGTG CTGGGCAAAG CCCTGCTCGC GGGCGCCTCG
GGCCAGCTGC GCAACAAGGC CACCACCGCC GGCAACCTGC TGCAGCGGAC CCGCTGCTAC
TACTTCTACG ACACGACCAA GCCCTGCAAC AAACGCGAGC CGGGCTCGGG CTGCGCGGCC
ATCGGCGGGT TCAACCGGAT CATGGCGGTG CTGGGAGCGA GCGATTCCTG CATCGCCACC
AACCCGTCCG ACATGAACGT CGCCATGCGC GTCCTCGACG CCACCGTGGA GACGATCGAT
CCGCAGGGCA GCGCGCGAAA GATTCCGATC GCCGCGTTCC ATCGCCTGCC CGGCGACACG
CCGCAGATCG AGACCGATCT CAAGCCCGGC GAACTCATCA CCGCCGTGAC GCTGCCCAAA
CCCGTCGAGG GCGTGCACCT CTACCGCAAG GTCCGCGACC GGGCCTCCTA CGCCTTCGCC
ACGGTGTCGG TCGCCGCCAT CATCGCGAAA GGCGAGGGCG ACAGGCCGAG ACTGGCCAAG
CTCGCCTTCG GTGGCCTCGC CCACAAGCCC TGGCGGGTCG AGGCGGCGGA GGCCGCGCTG
GTCGAGACCG GCTCGGCGGA CGCCGCCGCC GACCGGGTGC TGGAAGGCGC CCGCGGCCAG
GGCTCCAACG ACTTCAAGAT CCCGCTCACC CGCCGGACGC TGCGCGCCAC CGTCGCCGAA
GCTCTTCGCG CCTGA
|
|---|
| Protein sequence | MKAFAYERPA TVQDAARLAA DRPNARFIAG GTNLLDLMKL QIETPATLID VNRLPLAEVT
ETEEGGLRIG ALVRNSDLAA HPRLRKDYAV LGKALLAGAS GQLRNKATTA GNLLQRTRCY
YFYDTTKPCN KREPGSGCAA IGGFNRIMAV LGASDSCIAT NPSDMNVAMR VLDATVETID
PQGSARKIPI AAFHRLPGDT PQIETDLKPG ELITAVTLPK PVEGVHLYRK VRDRASYAFA
TVSVAAIIAK GEGDRPRLAK LAFGGLAHKP WRVEAAEAAL VETGSADAAA DRVLEGARGQ
GSNDFKIPLT RRTLRATVAE ALRA
|
|---|
| |