Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3888 |
Symbol | |
ID | 6312306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 4137288 |
End bp | 4138082 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 642652590 |
Product | UspA domain protein |
Protein accession | YP_001926550 |
Protein GI | 188583105 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0925098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGC CGCAGACCGC CGCCCCCACG GGCCTTCGTG ACATTCTCGT CGGCCTCACC GAGGAGGGCC GGGGCGACGA GACCGCGAGC GCGCTCAGCG TCGGCCTGTC GCTCGCCGGC CTGACCGGCG CCCATCTCAC CATCCAATCC GCCGCCCGCC ACCTGACCTT GGTCGCCGGA GCGGGCTGGG GCTTCGTCAA CGACCTCGTC GTGGAGGAGA ACCGCCGCCT GAGCGCCCGC GCCCGGGCCG TCGCCGAGCG CGCCGTGACG GAGGCGGCGC TCGAAGGCGT CAGCTGTTCG ATCGAGGTGC CCGCGCTCGC CTATCCGGAG CTGGTCGGGC GGCTCACCGC CCGCGCCCGG CTCGCCGACC TGACCGTCCT CGACGCCGAG GCGCGGGAAC TCGACCTCGA CCGCGACCTG ATCGACGGCG TCCTCTTCGG GAGCGGGCGC CCGCTCCTCG TGGTGCCGCC GGGCTGCGAT GCGTTCTCGG CCCGGCGGAT CCTCGTCGCC TGGGACGGCA GCGCCCAGGC GGCGCGGGCC GCCAACGACG CGCTGCCCTT CCTTCGGGCG GCCGAGGCGG TGGAGATCGT GTCCGTGGTC GGCGAGAAAG ATCTCTCGAC CGCGGTGGCG GGCGCCGAGT TCGCGCCGCA TCTGGCCCGC CACGGCGTGA ACGTGTCGGT GAACAGCGTG CCGGTTCAGG GCGACGCCGC GCAGACGCTC GAACGCCAAG CCAGCCTGTT CGGCGCGGAG ATGCTCGTGA TGGGCGCCTA CCGGCATTCG CGCCTGAAGG AATGA
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Protein sequence | MPKPQTAAPT GLRDILVGLT EEGRGDETAS ALSVGLSLAG LTGAHLTIQS AARHLTLVAG AGWGFVNDLV VEENRRLSAR ARAVAERAVT EAALEGVSCS IEVPALAYPE LVGRLTARAR LADLTVLDAE ARELDLDRDL IDGVLFGSGR PLLVVPPGCD AFSARRILVA WDGSAQAARA ANDALPFLRA AEAVEIVSVV GEKDLSTAVA GAEFAPHLAR HGVNVSVNSV PVQGDAAQTL ERQASLFGAE MLVMGAYRHS RLKE
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