Gene Mpop_3888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3888 
Symbol 
ID6312306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4137288 
End bp4138082 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content74% 
IMG OID642652590 
ProductUspA domain protein 
Protein accessionYP_001926550 
Protein GI188583105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0925098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGC CGCAGACCGC CGCCCCCACG GGCCTTCGTG ACATTCTCGT CGGCCTCACC 
GAGGAGGGCC GGGGCGACGA GACCGCGAGC GCGCTCAGCG TCGGCCTGTC GCTCGCCGGC
CTGACCGGCG CCCATCTCAC CATCCAATCC GCCGCCCGCC ACCTGACCTT GGTCGCCGGA
GCGGGCTGGG GCTTCGTCAA CGACCTCGTC GTGGAGGAGA ACCGCCGCCT GAGCGCCCGC
GCCCGGGCCG TCGCCGAGCG CGCCGTGACG GAGGCGGCGC TCGAAGGCGT CAGCTGTTCG
ATCGAGGTGC CCGCGCTCGC CTATCCGGAG CTGGTCGGGC GGCTCACCGC CCGCGCCCGG
CTCGCCGACC TGACCGTCCT CGACGCCGAG GCGCGGGAAC TCGACCTCGA CCGCGACCTG
ATCGACGGCG TCCTCTTCGG GAGCGGGCGC CCGCTCCTCG TGGTGCCGCC GGGCTGCGAT
GCGTTCTCGG CCCGGCGGAT CCTCGTCGCC TGGGACGGCA GCGCCCAGGC GGCGCGGGCC
GCCAACGACG CGCTGCCCTT CCTTCGGGCG GCCGAGGCGG TGGAGATCGT GTCCGTGGTC
GGCGAGAAAG ATCTCTCGAC CGCGGTGGCG GGCGCCGAGT TCGCGCCGCA TCTGGCCCGC
CACGGCGTGA ACGTGTCGGT GAACAGCGTG CCGGTTCAGG GCGACGCCGC GCAGACGCTC
GAACGCCAAG CCAGCCTGTT CGGCGCGGAG ATGCTCGTGA TGGGCGCCTA CCGGCATTCG
CGCCTGAAGG AATGA
 
Protein sequence
MPKPQTAAPT GLRDILVGLT EEGRGDETAS ALSVGLSLAG LTGAHLTIQS AARHLTLVAG 
AGWGFVNDLV VEENRRLSAR ARAVAERAVT EAALEGVSCS IEVPALAYPE LVGRLTARAR
LADLTVLDAE ARELDLDRDL IDGVLFGSGR PLLVVPPGCD AFSARRILVA WDGSAQAARA
ANDALPFLRA AEAVEIVSVV GEKDLSTAVA GAEFAPHLAR HGVNVSVNSV PVQGDAAQTL
ERQASLFGAE MLVMGAYRHS RLKE