| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3674 |
|---|
| Symbol | |
|---|
| ID | 6311950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3920416 |
|---|
| End bp | 3920943 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642652396 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001926358 |
|---|
| Protein GI | 188582913 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.78124 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCC CGAAGCGCGA CGTCCGACAC GCCGCCGTCT ACAAGGCCGG CATGATCCTG
AACCTCGATC GCCCCTGGCT TCATCGTCTG GCCCTGCGCG CCGCGCTCCT GACCCGCGGC
ATGACCCTCG GTGTGCGGGG CGTCGCCATC GACGGGGAGG GACGGGTCTG CCTCGTGCGC
CACACCTATG TCGGCGGCTG GCACCTGCCC GGCGGCGGGA TCGATCCGGG CGAGAGCGCG
CCCGCGGCGA TGGCCCGCGA GTTCCGCGAG GAGGCCGAGA TCGTGGTGGC GCCGGAGGCC
GGGCTGCGGC TGCACGGCTT CTTCCTGAAT CCGGGGGCGC AGCGGCGCGA CCACATCGCC
CTCTACGTCG CCCCGGCCTT CACGGTGGCG GCCCCCAAAC GGCCCGACCG CGAGATCGCC
GAGACCGGCT TCTTCCCCCT CGACGCCCTG CCACCGGACA CCACCCGCGC CACCCGCGCC
CGGCTCGCGG AGATCCGCGA CGGCACGCCT CCGGCCGAGT TGTGGTGA
|
|---|
| Protein sequence | MSGPKRDVRH AAVYKAGMIL NLDRPWLHRL ALRAALLTRG MTLGVRGVAI DGEGRVCLVR
HTYVGGWHLP GGGIDPGESA PAAMAREFRE EAEIVVAPEA GLRLHGFFLN PGAQRRDHIA
LYVAPAFTVA APKRPDREIA ETGFFPLDAL PPDTTRATRA RLAEIRDGTP PAELW
|
|---|
| |