| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3571 |
|---|
| Symbol | |
|---|
| ID | 6311597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3808160 |
|---|
| End bp | 3809086 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642652293 |
|---|
| Product | urea ABC transporter, permease protein UrtB |
|---|
| Protein accession | YP_001926255 |
|---|
| Protein GI | 188582810 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.410168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGCG ACTACTCGCT CGCAGACCTC AGCTCGATCT TCGTGATGCA GGGCTTCGCA
GGTCTGATCC TGTTTTCCGT CTACGTTCTG ATGGCTTTGG GCCTGGCGAT CATCTTCGGC
CAGATGGGCG TCATCAACAT GGCCCACGGC GAGTTCATGA TCCTGGGCGC CTACGTCACC
TATCTCTGCT CGACCTTCTT CCAGACCTAC CTGCCCTCGC TGTTCGGCGG CTACTTCTTC
GTCGCCATGG CACTCGCCTT CCTGGCATCG GGGGCGATGG GGATGCTGGT GGAATGGGCC
CTGATCCGCC ACCTCTACAA GCGCCCGCTC GACACGCTGC TGGCGACCTG GGGTCTCTCG
CTGATCCTGC AGCAGGCCTA CCGCACGATC TTCGGCCCGC GCGAGGTCGG CGTGGAACTG
CCCTCATGGA TGATGGGCTC GATCCCCGTC ACCGATTCGA TCGAGGTGCA GATCAACGGC
CTGTTCGTGA TCGCGGTCAC CACCGTCATC ACCCTCGGCG TCGCGGTGCT GATCTATCGC
TCCCGCTTCG GCGCGCAGAT CCGCGCGGTG ATGAGCAACC GTTCGATGGC GGGCGCCGTC
GGCATCGATA CCGAGAAGGT CGATCGCACC ACCTTCGGCC TCGGTTGCGG CATTGCCGGC
ATCGCCGGCT CGGCCTTCAC GATGATCGGT TCGACCGGCC CGACCTCCGG CCAGCTCTAC
ATCGTCGATA CCTTCCTGAT CGTGGTCTTC GGCGGCGCGG CCAGCCTGCT CGGCACCATC
GCCTCGGCCT TCTCGATCTC GCAGACCCAG TCGACCCTCG AATTCTTCCT CTCCGGCTCG
ATGGCCAAGG TGCTCACCCT CCTCGCGGTG GTGGCGATCC TGATGCTGCG GCCGCAGGGC
CTGTTCACCC TCAAGGTCCG TCGCTGA
|
|---|
| Protein sequence | MFGDYSLADL SSIFVMQGFA GLILFSVYVL MALGLAIIFG QMGVINMAHG EFMILGAYVT
YLCSTFFQTY LPSLFGGYFF VAMALAFLAS GAMGMLVEWA LIRHLYKRPL DTLLATWGLS
LILQQAYRTI FGPREVGVEL PSWMMGSIPV TDSIEVQING LFVIAVTTVI TLGVAVLIYR
SRFGAQIRAV MSNRSMAGAV GIDTEKVDRT TFGLGCGIAG IAGSAFTMIG STGPTSGQLY
IVDTFLIVVF GGAASLLGTI ASAFSISQTQ STLEFFLSGS MAKVLTLLAV VAILMLRPQG
LFTLKVRR
|
|---|
| |