| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3508 |
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| Symbol | |
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| ID | 6311456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 3739154 |
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| End bp | 3741883 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642652231 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001926193 |
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| Protein GI | 188582748 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.989959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCG TCGTCGTCGA GTCGCCGGCC AAGGCCAAGA CGATCAACAA ATATCTCGGA
CGCGACTACG AGGTTCTGGC CTCGTTCGGC CATATCCGCG ATCTGCCGGC CAAGGACGGC
TCGGTCGATC CGGAGGCCGA TTTCGCCATG GTCTGGGAGC TGGAGGATCG CGGCTCGAAG
CGCGTGTCCG AGATCGCCCG CGCGATCAAG GGCGCCGAGA AGCTCATCCT CGCCACCGAC
CCGGATCGCG AGGGCGAGGC GATCTCCTGG CACGTCATCG AGGCGCTCTC GGCCCGCAAG
GCGCTGAAGG GCATCCCGGT CGAGCGCGTG ACCTTCAACG CCATCACCAA GGCGTCGGTC
GACGCGGCGA TGCGCAAGCC CCGCGAGATC GACCAGGCGC TGGTCGATGC CTATCTCGCG
CGCCGCGCGC TGGATTACCT CGTCGGCTTC AACCTCTCGC CGGTGCTGTG GCGCAAGCTC
CCCGGCGCCC GCTCGGCCGG CCGCGTGCAG TCGGTGGCGC TCCGCCTCGT GGTCGAGCGC
GAGATGGAGA TCGAGCGCTT CAAGCCCCGC GAGTACTGGT CGATCGTCGC CACGCTGGCC
ACGGAAGCCG GCGGCGTGTT CGAGGCCCGG CTCGTCGGCG CCGACGGCAA GCGCATCCAG
CGCCTCGATG TCGGCAATGC CGAGGAGGCC GCCGCCTTCA AGCGCGACCT CGAACTCGCG
ACCTTCCAGG TGGCCTCCGT CGAGGCCAAG CCCGCCAAGC GCCACCCGCA GCCGCCCTTC
ACCACCTCGA CGCTGCAGCA GGAGGCCTCG CGCAAGCTCG GCATGGCGCC GGCGCAGACC
ATGCGGGTTG CCCAGAAGCT CTATGAGGGC GTGGATGTCG GCGGCGAGAC GGTCGGCATC
ATCACCTATA TGCGAACCGA CGGCGTCGAC ATGGCGCCGG AGGCGATCTC GGATGCCCGC
CGGGTGATCG GCCGCGAGTT CGGCGACGAC TACGTGCCGG GCGCGCCGCG CAAGTATTCG
GTCAAGGCCA AGAACGCGCA GGAAGCGCAC GAGGCCGTGC GCCCGACCGA TATGGGCCGG
TTGCCCAAGC AGGTCGCCCG CTACCTCGAA CCCGAGCAGG CGAAGCTCTA CGAATTGATC
TGGACGCGCA CGATCGCGAG CCAGATGGAA TCGGCCGAAC TCGAGCGCAC CACCGTCGAA
GTCACCGCAA GCGTCGGCCC GCGGCGGATC GACCTGCGCG CGACGGGTCA GGTCGTGAAG
TTCGACGGTT TCCTCGCCCT CTACCAGGAA GGCAAGGACG ACGAGGAGGA CGAGGATTCG
AAGCGCCTGC CGGCGATGGC GGCCGGCGAT CCGCTCAAGC GCGAGCGCAT CGCCTCGACC
CAGCACTTCA CCGAGCCGCC GCCGCGCTAT TCCGAGGCGA GCCTCGTCAA GCGGATGGAG
GAACTCGGCA TCGGCCGGCC CTCGACCTAC GCCGCGGTGC TGCAGACCCT GCGCGACCGC
GAATACGTCA AGATCGAGAA GAAGCGCCTC CAGCCGGAGG ACAAGGGTCG GCTCGTCACC
GGTTTCCTCG AGAGCTTCTT CAAGCGCTAC GTCGAGTACG ATTTCACCGC GAGCCTGGAG
GAGCAGCTCG ACCGGGTCTC GAATGCCGAG ATCGACTGGC GCTCGGTGCT GCGCGACTTC
TGGCGCGACT TCTCGGCGGC CATCGGCGGC ACCAAGGAGC TGCGCGTCGC GGAGGTGCTC
GAAGCCCTCA ACGGGCTGCT CGGACCGCAC ATCTTCCCCG AGAAGGCGGA TGGCGGCGAT
CCGCGGGCCT GCCCGACCTG CGGCTCGGGC CAGCTCTCGC TGAAGCTCGG CAAGTTCGGC
GCCTTCATCG GCTGCTCGAA CTACCCGGAG TGCAAGTACA CTCGGCAGCT CTCGGCCTCC
GGCGTCGAGG GTGAGGGCGA CGGCTCCTCC GCGGAGGGCG GCCAGCCCGG CGTGCGGGTG
CTCGGCGACG ATCCCGCTAC CGGCTTGCCC GTGACCCTGC GCGACGGCCG CTTCGGACCC
TTCGTGCAAC TCGGCGAGGC ATCGTCCGAG AAGGGCGCGG AGAAGCCGAA GCGCTCCTCG
CTGCCGAAGG GCACGAGCCC GGGCAGCGTC ACGCTGGAGA TCGCCCTGCG CCTGCTCTCG
CTGCCGCGCG AGGTCGCCAA GCACCCGGAG ACCGGCGAGC CGATCCTGGC CAATCTCGGC
CGCTTCGGCC CCTACGTGCA GCACGGAAAG ACCTACGCCA ACCTCGGCAA GGACGACGAC
GTGCTGGAGA TCGGCGCCAA CCGCGCCATC GATCTCATCG TCGCCAAGGA GCAGGGCGGC
GGTCGTGGCC GCCCCTCCTC CGATCCCGGC CGCGCGCTGG GCCCGCATCC CGACGGAGCG
GCGCTCGTGG TCAAGGCCGG CAAGTACGGC CCCTATGTCA GCGACGGCTC GGTCAACGCG
ACGCTGCCGA AGACGATGGC CGCCGAGAGC CTGACGCTGG AACAGGCGAT CGAGCTCATC
AACGCCAAGC GCGCCTCGGG CGGGGGTAAG AAGCCGGTTC GCAAGACGGC CACGCGCGCC
CGCACGGCGA CGAAGGCGGC GGACGGTGCC GAGGCGAAGA AGCCCGCGGT CCGCAAGACG
GCGAGCAAGA CGGCCAGCAA GTCGACAACG AAGGCTGCGG CCAAGCCGGC GGCTGCCAAG
AAGGCGGCGG CGAAGACCAA GGCGAGCTGA
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| Protein sequence | MKVVVVESPA KAKTINKYLG RDYEVLASFG HIRDLPAKDG SVDPEADFAM VWELEDRGSK
RVSEIARAIK GAEKLILATD PDREGEAISW HVIEALSARK ALKGIPVERV TFNAITKASV
DAAMRKPREI DQALVDAYLA RRALDYLVGF NLSPVLWRKL PGARSAGRVQ SVALRLVVER
EMEIERFKPR EYWSIVATLA TEAGGVFEAR LVGADGKRIQ RLDVGNAEEA AAFKRDLELA
TFQVASVEAK PAKRHPQPPF TTSTLQQEAS RKLGMAPAQT MRVAQKLYEG VDVGGETVGI
ITYMRTDGVD MAPEAISDAR RVIGREFGDD YVPGAPRKYS VKAKNAQEAH EAVRPTDMGR
LPKQVARYLE PEQAKLYELI WTRTIASQME SAELERTTVE VTASVGPRRI DLRATGQVVK
FDGFLALYQE GKDDEEDEDS KRLPAMAAGD PLKRERIAST QHFTEPPPRY SEASLVKRME
ELGIGRPSTY AAVLQTLRDR EYVKIEKKRL QPEDKGRLVT GFLESFFKRY VEYDFTASLE
EQLDRVSNAE IDWRSVLRDF WRDFSAAIGG TKELRVAEVL EALNGLLGPH IFPEKADGGD
PRACPTCGSG QLSLKLGKFG AFIGCSNYPE CKYTRQLSAS GVEGEGDGSS AEGGQPGVRV
LGDDPATGLP VTLRDGRFGP FVQLGEASSE KGAEKPKRSS LPKGTSPGSV TLEIALRLLS
LPREVAKHPE TGEPILANLG RFGPYVQHGK TYANLGKDDD VLEIGANRAI DLIVAKEQGG
GRGRPSSDPG RALGPHPDGA ALVVKAGKYG PYVSDGSVNA TLPKTMAAES LTLEQAIELI
NAKRASGGGK KPVRKTATRA RTATKAADGA EAKKPAVRKT ASKTASKSTT KAAAKPAAAK
KAAAKTKAS
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