Gene Mpop_3302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3302 
Symbol 
ID6311161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3529410 
End bp3530285 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content75% 
IMG OID642652025 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_001925988 
Protein GI188582543 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.285682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.651535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCTGC TCACCACCCG CGCGCCGGCC AAGATCAACC TGACCCTCCA CGTGCTCGGG 
CGCCGGCCCG GCGATGGGTA TCATGCGCTC GAAAGCCTCG TGGCCTTCGC CGAGGTGGCC
GACACGCTCG AACTGCTGCC CGGCCGTGAC CTTGCGCTGG AAGTCTCCGG CCCGACCGCC
GGCCCGGCGG GGCCGCTCGA CGACAACCTC GTCCTGCGCG CCGCCCGCCA CCTCGCCGCG
GGCGTTGATG GGCTCAGGCT CGGTGCGTTC CGGCTTCACA AGCAACTGCC CGTGGCAGCC
GGGATCGGCG GCGGCTCATC GGATGCGGCC GCCGCCCTGC GGTTGCTCGC CGAGCTGAAC
GCCCTCGCCC TCGACCACCC GGCCGTCATC GCCGCGGCCC GCGCCACGGG GGCCGACGTG
CCGGTCTGCC TCGATCCGCG GGCGCGGATG ATGCGCGGCG CGGGCGAGGA GATCGGGCCC
GTGCTCGAAC TCGCGCCCCT GCCGGCGGTG CTGGTCAATC CGGGTGTGCC GGTCTCGACC
GCGCCGGTGT TCAAGGCGCT CGGTCTCGCA GTCGGTCAGC GCCTCGACGG GGCCGAACAC
CCGGGCGTCG CCGCAGGCCT CGATGCTGAT GCCGTCCTCG GCGTGATCGC CCCCGCGCGC
AACGATCTGG AAGCACCCGC GCTCACCGTC GCCCCGGTCA TCGGCGAGGC GCTGGCGCTG
CTGCGGGCGC AGGGCGGCTG CCGGCTGGCG CGGATGTCGG GCTCGGGCGC GACAGTGTTC
GCGATCTTCT CCGACACGGC GGCGGCGCAG GCCGCCGCGG GCGCGGTCCG CGTCGCGCAA
CCGGGCTGGT GGGTCGAGCC GACGCGGCTT GCCTGA
 
Protein sequence
MSLLTTRAPA KINLTLHVLG RRPGDGYHAL ESLVAFAEVA DTLELLPGRD LALEVSGPTA 
GPAGPLDDNL VLRAARHLAA GVDGLRLGAF RLHKQLPVAA GIGGGSSDAA AALRLLAELN
ALALDHPAVI AAARATGADV PVCLDPRARM MRGAGEEIGP VLELAPLPAV LVNPGVPVST
APVFKALGLA VGQRLDGAEH PGVAAGLDAD AVLGVIAPAR NDLEAPALTV APVIGEALAL
LRAQGGCRLA RMSGSGATVF AIFSDTAAAQ AAAGAVRVAQ PGWWVEPTRL A