| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3289 |
|---|
| Symbol | |
|---|
| ID | 6311100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3517967 |
|---|
| End bp | 3520141 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642652012 |
|---|
| Product | glycyl-tRNA synthetase, beta subunit |
|---|
| Protein accession | YP_001925975 |
|---|
| Protein GI | 188582530 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0726267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.258667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACC TCCTCCTCGA ACTCCTCTCC GAAGAGATCC CCGCGCGCAT GCAGCGGCGT
GCGGCCGAGG ATCTGAAGAA GCTCGTCACC GACGCGCTGG TCGAGCGCGG TTTCCTCTAC
GAGGGCGCAA AGGCCTTCGC GACGCCGCGG CGGCTGGCGC TGCACGTCGC CGGGCTGCCC
GCCCGCGGCG ACGCCGTGCG CGAGGAGCGG CGCGGACCGC GCGTCGGCGC GCCCGAGGCG
GCCGTGCAGG GCTTTCTGAA GAGCGCGGGG CTGTCGAGCC TCGATCAGGC CACCACCGTC
ACCGATCCGA AGAAGGGCGA GTTCTACCTC GCGGTGATCG AGAGGCCCGG CCGCGAGACC
CTCGACGTGC TGGCTGAGAT CCTGCCGGGC ATCATCAAGA GCTTCCCCTG GCCGAAATCG
ATGCGCTGGG GCGCGGCCTC GGCCCAGCCC GGCTCCCTGC GCTGGGTGCG CCCGCTGCAA
TCGATCGTCG CTACCTTCGG CCCCGAGACC GAGACGCCGG ACGTGGTGCC GTTCGCGGTC
GAGGGCATCA GCGCCGGCAC CACGACGCGC GGCCACCGCT TCCTCAGTCC CGAGCCGTTC
GAGGTGCGCC GCTTCGACGA TTACGTGCCG GCGCTGGAGC GCGCCGATGT GATCCTCGAC
GCCGACCGGC GCAAGGACAT CATCCTGCAC GACGCCAAGG ATCTCGCCTT CGCCCGCGGC
CTCGACCTCG TGGAGGACGA GGGCCTGCTG GAGGAGGTCG CCGGGTTGGT GGAGCGGCCC
GTGGTGCTGA TGGGCTCCTT CGAGGAGCGG TTCCTCGAGA TTCCGGCCGA GGCGATCCGC
GCGACCATCC GCGCCAACCA GAAATGCTTC GTCCTGCGCA AGTCCGGCTC CGAGGAACTG
GCGCCGGCCT TCCTGCTGGT CTCGAATCTC GTCGCCTCCG ACGGCGGCGC GGCGATCACC
GCCGGCAACG AGCGCGTGGT GCGCGCCCGG CTCTCGGACG CACGGTTCTT CTGGGAGACC
GACAAGGCGA CCAAGCTCGA AGACCGGCTG CCGAAGCTCG ATGCGATCGT CTTCCACGAG
AAGCTTGGGA CGCAGGGTGA GCGCGTTGCC CGCATCGCCG GTCTGGCGCG TCGGATCGCC
TCCGACATCG ACGTCCAGTT CGACCTTGAT CTCGTCGAGC GGGCTGCGCG CCTCGCCAAG
GCGGATCTCG TAACCGAGAT GGTCGGCGAG TTTCCGGAAC TCCAGGGCTT GATGGGGCGG
AAATATGCGA CCTTGCAGGG CGAGGATCCG CGCGTCGCGG CCGCCATCGA GGAGCATTAC
AAGCCGCTCG GCCCAAGCGA TCGCGTGCCG ACGGAGATCG TGTCGATCGC GGTCGCGATG
GCCGACAAGC TCGATCTGCT GGCCGGTTTC TGGTCGATCG ACGAGAAGCC CACGGGCAGC
AAGGATCCGT TCGGTCTGCG CCGTGCCGCG CTCGGCGTGA TCCGCCTGAT CCTCGAGAAC
GGATTGCGTC TACCGCTTCT CGACGGGCCG ATCTGGGATG CCTTCGACGA ACTGCCGGGG
AAGTCCGTCG CGATCCTCGA CCTGTCGAGC GTCGCCGCAC TCGACGCGCT CGACGAAGAC
ACCGAGTTGA CCGATCCGCG GGCGAAGGAC CTCCTCGCCT TCTTCGCCGA CCGCCTCAAG
GTCTACCTTC GCGATCAGGG CGCTCGCCAC GACCTGATCG ACGCCGTCTT CGCCCTGCCC
GGCCAGGACG ACCTCCTGCT CGTCGTGCGC CGCGTCGAGG CGTTGGGCGC GTTCCTCGCC
ACCGACGACG GCAAGAACCT GCTCGCCGGC TACAAGCGCG CGGCCAACAT CCTGCGCATC
GAGGAGAAGA AGGATGGCCG CGCCTACGAT GCAGAGCCCG ACGCGGCGCT TGCGGCTTCC
GGAGAGCCGG AGGAGCGGGC GCTCGCCGAG GCGCTGACGG CGACGCGCGA GGAGGCCTCC
GCAGCGGTGG CGGCCGAGGA CTTTTCGGGG GCGATGCGGG CGCTGTCGCG GCTGCGGGCG
CCGGTGGACG CCTTCTTCGA GAAGGTCACC GTCAACGCCG ACGACCCGGC CCTACGCCGG
AACCGGCTCC TGCTCCTCAA CGCCCTGCGC GCCGCCACCC GCGAGGTGGC CGAGTTCTCA
CGCATCGAGG GCTGA
|
|---|
| Protein sequence | MPDLLLELLS EEIPARMQRR AAEDLKKLVT DALVERGFLY EGAKAFATPR RLALHVAGLP
ARGDAVREER RGPRVGAPEA AVQGFLKSAG LSSLDQATTV TDPKKGEFYL AVIERPGRET
LDVLAEILPG IIKSFPWPKS MRWGAASAQP GSLRWVRPLQ SIVATFGPET ETPDVVPFAV
EGISAGTTTR GHRFLSPEPF EVRRFDDYVP ALERADVILD ADRRKDIILH DAKDLAFARG
LDLVEDEGLL EEVAGLVERP VVLMGSFEER FLEIPAEAIR ATIRANQKCF VLRKSGSEEL
APAFLLVSNL VASDGGAAIT AGNERVVRAR LSDARFFWET DKATKLEDRL PKLDAIVFHE
KLGTQGERVA RIAGLARRIA SDIDVQFDLD LVERAARLAK ADLVTEMVGE FPELQGLMGR
KYATLQGEDP RVAAAIEEHY KPLGPSDRVP TEIVSIAVAM ADKLDLLAGF WSIDEKPTGS
KDPFGLRRAA LGVIRLILEN GLRLPLLDGP IWDAFDELPG KSVAILDLSS VAALDALDED
TELTDPRAKD LLAFFADRLK VYLRDQGARH DLIDAVFALP GQDDLLLVVR RVEALGAFLA
TDDGKNLLAG YKRAANILRI EEKKDGRAYD AEPDAALAAS GEPEERALAE ALTATREEAS
AAVAAEDFSG AMRALSRLRA PVDAFFEKVT VNADDPALRR NRLLLLNALR AATREVAEFS
RIEG
|
|---|
| |