Gene Mpop_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3176 
Symbol 
ID6310640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3410388 
End bp3411488 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content70% 
IMG OID642651899 
Productchorismate synthase 
Protein accessionYP_001925863 
Protein GI188582418 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACA ACACCTTCGG CCACCTGTTC CGCGTCACCA CCTTCGGCGA GAGCCACGGG 
GTGGCGCTCG GCTGCGTGGT GGACGGGTGC CCGCCCGGCC TCGCCCTGGA AGCCGAGGAG
ATCCAAGCGG AGCTCGACCG GCGCAAGCCC GGCCAGTCGC GCTTCACCAC GCAAAGGCGC
GAGCCCGATC AGGTGAAGAT CCTGTCGGGC GTGTTCGGCG ACGACCGCAC GGGCGGGCGC
CAGCTCACCA CCGGCACGCC GATCGCGCTG ATGATCGAGA ACACCGATCA GCGCTCGAAG
GACTATTCCG AAATCCGCGA CAGCTACCGC CCCGGCCACG CCGACTATAC CTACGACGCC
AAATACGGCT TTCGCGATTA CCGCGGCGGC GGGCGCTCGT CGGCGCGAGA GACGGCGGCA
CGCGTCGCCG CTGGCGCGAT CGCCCGCAAG GTGATCCCCG GCATCACGAT CCGCGCCGCC
CTGGTGCAGA TGGGCCCGCA CGCCATCGAC CGCGCGAACT GGGATTGGGC GGAGGTCGGC
AACAATCCGT TCTTCTGCCC GGACGCCAAG GCGGCCGCGC TCTACGAGAG CTATCTCGAC
GGGATCCGCA AGGACGGCTC CTCGGTCGGC GCGGTGATCG AGGTGATCGC CGAGGGCGTG
CCCCCCGGCC TCGGCGCGCC GATCTACGGC AAGCTCGATG CGGATCTCGC CGCGGCGATG
ATGTCGATCA ACGCGGTCAA GGGCGTCGAG ATCGGCGACG GCTTCGCGGC CGCCGCGCTG
CGCGGCGAGG ACAATGCCGA CGAGATGCGC GCCGGCAATG ACGGTCGCCC GCGCTTCCTC
GGCAATCATG CCGGCGGCAT CCTGGGCGGC ATCTCGTCGG GCGAGCCGAT CGTGGTGCGC
TTTGCCGTGA AGCCGACCTC CTCGATCCTG ACGCCGCGGC AAAGCGTGAA TCGCCAGGGT
GAAGAAATCG ACCTCGTCAC CAAGGGCCGC CACGACCCCT GCGTCGGCAT CCGCGCCGTT
CCCGTCGCCG AGGCGATGAT GGCGTGCGTG CTGGCCGATC ACCATCTCCG CCATCGCGGG
CAGGTCGGCG ACCGCGTCTG A
 
Protein sequence
MSHNTFGHLF RVTTFGESHG VALGCVVDGC PPGLALEAEE IQAELDRRKP GQSRFTTQRR 
EPDQVKILSG VFGDDRTGGR QLTTGTPIAL MIENTDQRSK DYSEIRDSYR PGHADYTYDA
KYGFRDYRGG GRSSARETAA RVAAGAIARK VIPGITIRAA LVQMGPHAID RANWDWAEVG
NNPFFCPDAK AAALYESYLD GIRKDGSSVG AVIEVIAEGV PPGLGAPIYG KLDADLAAAM
MSINAVKGVE IGDGFAAAAL RGEDNADEMR AGNDGRPRFL GNHAGGILGG ISSGEPIVVR
FAVKPTSSIL TPRQSVNRQG EEIDLVTKGR HDPCVGIRAV PVAEAMMACV LADHHLRHRG
QVGDRV