| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3162 |
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| Symbol | lysK |
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| ID | 6310733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 3396026 |
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| End bp | 3397729 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642651885 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001925849 |
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| Protein GI | 188582404 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1384] Lysyl-tRNA synthetase (class I) |
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| TIGRFAM ID | [TIGR00467] lysyl-tRNA synthetase, archaeal and spirochete |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.152215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGC CCCTCCGCCT CGACCCCGAT ATCCTGGAGG CCGCCGCCTC CGCCGCCGCC
TGGCCGTTCG AGGAGGCGCG CAAGCTCGTG GCGCGGCTGG AGAAGAAGCC GAAGAGCGAG
GTGCTGTTCG AGACCGGTTA CGGCCCCTCG GGTCTGCCGC ATATCGGCAC GTTCGGCGAG
GTCGCCCGCA CCTCGATGGT GCGCCACGCC TTCCGCGTGC TGACCAACGA CGCGGTGCCG
ACCCGGCTGA TCGCCTTCTC GGACGACATG GATGGCCTGC GCAAGGTGCC GGACAACGTG
CCGAACCGCG AGATGCTGCG CGACGCGCTC AACCTGCCGC TGACCAAGGT GCCCGACCCG
TTCGGCACGC ATGAGAGCTT CGGCGCGCAC AACAACGCGG AACTCCGCCG CTTCCTCGAC
GCCTTCGGCT TCGATTACGA GTTCCGCTCG GCCACCGAGT GCTATCGGTC GGGCGTCTTC
GACGACACGC TGCGCCTCGT GCTGGAGCGC TACGACGCGG TGATGGCGAT CATGCTGCCC
TCGCTGCGGG CCGAGCGTTC GGCGAGCTAC TCGCCGTTCC TGCCGATCCA CCCGGTGACG
GGCCACGTGA TGCAGGTGGC GATCGACGAG GTGCGCCCGA GCGCCGGCAC CATCGTCTGG
CGCGATCCGG CGACGAACGA GGTCTACGAG ACGCCGGTGA CCGGCGGCCA CGTCAAGCTG
CAATGGAAGC CCGACTGGGC CATGCGCTGG GTGGCGCTCG GCGTCGATTA CGAGATGGCG
GGCAAGGACC TGATCGATTC GGTCAAGCTC TCGGGCCAGA TCGCACGGGC CCTGGGGGCG
GAACCGCCCG AGGGCTTCAA TTACGAGCTG TTTCTCGACG AAAAAGGCCA GAAGATCTCG
AAGTCGAAGG GCAATGGCCT GACCATCGAC GAGTGGCTGA CCTATGCCAC GCCCGAGTCG
CTCGCGCTGT TCATGTACAA CAAGCCGCGC GAGGCCAAGC GCCTGTTCTT CGATGTGATT
CCGCGCCACG TCGACGAATA CGACAACTTC CTCGGCCGCT TCGCCGGCCA GGAGGCGAAG
CACCGGCTTG GCAACCCGGT CTGGCATCTG CACGCGGGTG CACCGCCCGC GGTCGAGACC
ATCGACGAGG CCGGCACCAC GCTGTCCTTC GGCATGCTCT TGAACCTCGT CGCGGTGGCC
AATGCCGAGG ACGAGGCGGT GCTGTGGGGC TTCATCCGCC GCTACGCGCC GAATGTCGGG
CCGGAGACGC ATCCGCGGCT CGCCGGCCTC GTGACCCGGG CGCTCGCCTA TTACCGGGAC
TTCGTGCGGC CGCAGAAGCA GTACCGCGCG CCCACCGAGG AGGAGGCCAC GGCCCTGCGC
GACCTGTCCG AGACGCTCAA GGAGCACGAG GGCTCGGCCG ATCCGGAGGC GCTGCAGGCG
GTGGTCTACG AGGTCGGCCG GCGCCACTTC CCCGACCTGT CGGGCAAGGC CAAGAGCCCG
GACGGGCGGC CCGGCGTGTC GAAGACGTGG TTCGCCTCGA TCTACAACGT GCTGTTCGGC
GAGGCGCAGG GCCCGCGCTT CGGCTCGTTC ATCGCGCTCT ACGGCGTGGC CGGCACGCGG
GCGCTGATCG AGAAGGCGCT GAGCGGCGCG CTGGTGGCCG AACATGCGGC CTTCCTCGAC
AGCCGCAAGG CCGCGGCGGA GTGA
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| Protein sequence | MSAPLRLDPD ILEAAASAAA WPFEEARKLV ARLEKKPKSE VLFETGYGPS GLPHIGTFGE
VARTSMVRHA FRVLTNDAVP TRLIAFSDDM DGLRKVPDNV PNREMLRDAL NLPLTKVPDP
FGTHESFGAH NNAELRRFLD AFGFDYEFRS ATECYRSGVF DDTLRLVLER YDAVMAIMLP
SLRAERSASY SPFLPIHPVT GHVMQVAIDE VRPSAGTIVW RDPATNEVYE TPVTGGHVKL
QWKPDWAMRW VALGVDYEMA GKDLIDSVKL SGQIARALGA EPPEGFNYEL FLDEKGQKIS
KSKGNGLTID EWLTYATPES LALFMYNKPR EAKRLFFDVI PRHVDEYDNF LGRFAGQEAK
HRLGNPVWHL HAGAPPAVET IDEAGTTLSF GMLLNLVAVA NAEDEAVLWG FIRRYAPNVG
PETHPRLAGL VTRALAYYRD FVRPQKQYRA PTEEEATALR DLSETLKEHE GSADPEALQA
VVYEVGRRHF PDLSGKAKSP DGRPGVSKTW FASIYNVLFG EAQGPRFGSF IALYGVAGTR
ALIEKALSGA LVAEHAAFLD SRKAAAE
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