| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2646 |
|---|
| Symbol | |
|---|
| ID | 6312292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 2875662 |
|---|
| End bp | 2877236 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642651370 |
|---|
| Product | protein of unknown function DUF162 |
|---|
| Protein accession | YP_001925338 |
|---|
| Protein GI | 188581893 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
|---|
| TIGRFAM ID | [TIGR00273] iron-sulfur cluster-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.362725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.743533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG ACGACCTGAC CCCGCGCCAG ACCGAGGATG TGCTCCATCC GGAAGTGCGC
GCAGCCTCCG ACGAAAGCGA GCGCGGCCCC GGCGGCGACC GGCTCCAGCA CGCGGAGGCC
GCCTCGAAGC CGATCCGCGC CGACGCCCCC CGCGAGCCGC AGCCCCGCGG CGCCAAGGTG
CGCGGAAATC GGCCGATCGA TCAGGCGGAG GCCGCCGAGC GCTTCCTCGC GGCGCCGCTG
CATCAGAAGG CCCATGACGA GCGCCTGTGG GACGTGCGCC GCAAGCGCGA TGTCGCCGCC
CACGGCATCC CCGAATGGGA GGAGCTTCGC GAACTCGCCT CGCAGATCAA GACGCACACG
CTGACCCATC TCGACCACTA CCTCGAACAG TTCGAGGCGG CGGCGCGGGC CAACGGCGTC
CATGTCCACT GGGCCGAGGA TGGGGCGGAC CACAACCGCA TCGTCCTCGA CATCCTGCGG
AAGCACGGCG CCAAGTCGCT GGTGAAGTCG AAGTCGATGC TCACCGAGGA ATGCGGCTTC
CGCCACTTCA TGGCCGCCCA CGACATCGAC GTGATCGAGA CCGATCTCGG CGAGCGCATC
CAGCAGCTCG ACGAGGAGGA GCCGAGCCAC GTGGTGATGC CGGCGGTCCA CAAGACCCGC
CTCGACGTCG CCGACGTGTT CGCGCGGACG CTCGGCACCG ATCCCGACAA CGACGACGCC
CACTACCTCG CCGAGAGCCA GCGCGAGACA ACCCGTCCGC TGATCCTCAA GGCGGATGCG
GGGCTGACCG GCTGCAACTT CGCCATCGCC GAGACCGGCA CGGTCGTCAC CTGCACCAAC
GAGGGCAATG CCGACCTCTC CGGCAACGTG CCGCCGCTGC AGATCCACTC CATCGGCATC
GAGAAGATCA TCCCCAAGGT CGAGCATCTC GGCGTGTTCA TCCGCCTGCT GTCGCGCTCG
GCTCTCGGTT CGCCGATCAC CCAGTACACC TCGCATTTCC GCGGGCCGCG GCCCGGCACC
GAAATGCATA TGGTGCTGGT CGATAACGGC CGCTCCGAGC GGCTGGCGAT GGAGGAGTTC
TGGACCTCGC TCAAATGCAT CCGCTGCGGC GCCTGCATGA ACACCTGCCC GGTCTACCGG
CGCTCGGGCG GCCTCTCCTA CGGCGCCACC TATTCCGGTC CGATCGGGCT CATCATCGAC
CCGACCTTCA ACAAGCGGAA ATACTCGACC CTGCCGTTCT CCTCGACCAT GAACGGCTCA
TGCACCAATG TCTGCCCGGT GAAGATCAAC ATTCACGAGC AGATCTTCGC ATGGCGCAAG
GTGCTGGCCG AGGAGCACCA GATCCCGCTG CTGAAGCAGG GCATGATGAA GGCGGCCGGC
GCCGTGCTGA GCCGGCCCGC CGCCTACCGC GCGGCGATCC AGACTGCCGA TTCGGCCCTG
CGCGTGCTGC CGCGCTTTGC CGTCTACAAC CCGGCCAACA CCTGGGGGAA GAAGCGCGAG
ATGCCCCACG CGCCGCGCCA GAGCTTCCAC GCGTGGTATC GCCAGAACCG GATGAAGAAG
GGGACGGAGG CGTGA
|
|---|
| Protein sequence | MSADDLTPRQ TEDVLHPEVR AASDESERGP GGDRLQHAEA ASKPIRADAP REPQPRGAKV
RGNRPIDQAE AAERFLAAPL HQKAHDERLW DVRRKRDVAA HGIPEWEELR ELASQIKTHT
LTHLDHYLEQ FEAAARANGV HVHWAEDGAD HNRIVLDILR KHGAKSLVKS KSMLTEECGF
RHFMAAHDID VIETDLGERI QQLDEEEPSH VVMPAVHKTR LDVADVFART LGTDPDNDDA
HYLAESQRET TRPLILKADA GLTGCNFAIA ETGTVVTCTN EGNADLSGNV PPLQIHSIGI
EKIIPKVEHL GVFIRLLSRS ALGSPITQYT SHFRGPRPGT EMHMVLVDNG RSERLAMEEF
WTSLKCIRCG ACMNTCPVYR RSGGLSYGAT YSGPIGLIID PTFNKRKYST LPFSSTMNGS
CTNVCPVKIN IHEQIFAWRK VLAEEHQIPL LKQGMMKAAG AVLSRPAAYR AAIQTADSAL
RVLPRFAVYN PANTWGKKRE MPHAPRQSFH AWYRQNRMKK GTEA
|
|---|
| |