Gene Mpop_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2613 
Symbol 
ID6313684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2843848 
End bp2844576 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID642651337 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_001925305 
Protein GI188581860 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.713064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCCG AGACCGCCCT CCGGGTCCGC CTCGAGCTTC CGGACCATGC GCCCCACATC 
CTGCTCGTCG ATGACGACCG CCGGGTGCGC GAGCTCCTGT CCCGGTTCCT CTCCGAGCAG
GGATTCCGCG TGACGGCCGC CGCGAACGCC GCCGAGGCGC GTCTGCGCGG GCAGTGCTTC
GTGTTCGACG CCCTCGTGCT CGACGTGATG ATGCCCGGCG AGAGCGGCTT CGACTATGCC
CGCTCGGTGC GCGAGACCTC GCGGGTGCCG ATCCTGATGC TGACCGCCCG TTCCAACCCC
AACGACCGGG TGACGGGTCT GGAGATCGGC GCCGACGACT ACCTGCCCAA GCCCTTCGAG
CCGCGCGAGC TGATCCTGCG GCTCAACAAC ATCATCCGCC GCCATGCCGC CGTGCCGGAG
ACCCGCTTTT CCGGCGAGGA CGCGGTCAGC TTCGGTCCGT TCAGCTTCCG CGCCGACCGG
GGCGAGTTGC GCCGGGAGAG CGAGCCGGTG AAGATCACCG AACGCGAGCG CGAGATCCTG
ACCATGCTGG CTCAGGCGCG GGGCGGCAAC GTCGAGCGCG AGACGCTCGC CGGCAACGGC
GGCCTGGCGG CCGAACGCAC CATCGACGTG CAGATCAACC GCCTGCGCCG TAAGATCGAG
CCGGATCCGG CCAATCCGAG CTTCCTGCAC ACCGTTCGCG GCGTCGGCTA TCGCCTCGCC
ATCGATTGA
 
Protein sequence
MSAETALRVR LELPDHAPHI LLVDDDRRVR ELLSRFLSEQ GFRVTAAANA AEARLRGQCF 
VFDALVLDVM MPGESGFDYA RSVRETSRVP ILMLTARSNP NDRVTGLEIG ADDYLPKPFE
PRELILRLNN IIRRHAAVPE TRFSGEDAVS FGPFSFRADR GELRRESEPV KITEREREIL
TMLAQARGGN VERETLAGNG GLAAERTIDV QINRLRRKIE PDPANPSFLH TVRGVGYRLA
ID