Gene Mpop_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2552 
Symbol 
ID6312515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2776972 
End bp2778261 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content72% 
IMG OID642651276 
ProductABC-type multidrug transport system ATPase and permease components-like protein 
Protein accessionYP_001925244 
Protein GI188581799 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.263362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0193136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCACCC CGCCGATCAT CCACGAGCTC ATCCACTGGA CGTTGGGCCT CGACCACGCC 
CACGCCCACT GGTGGATCGA CCTCGTCACC GTGGTGGTCC TCGTCGTGGC GCCTGCCTGG
ACCGCTTGGC TCGCGGCCCG GTCGGGCCTG CGCTGGGCCG CCGCCCGACG GGATCGCGTC
CGCAAGGGGA GAGCGGTGCC CTCGTCCGCC GCGTCCACGG GCGCCGCGGG GCGGCCAGGT
TCCCGTGAGA CCGGCGCGGT GCCGCTGGAG GCCTACGTCG TGCGTGCGAC GTCGCGGCTG
CAGGTCCGTC TCGTGCTCCT CTCCGTCCTG ACGCTGCCGG CGGCCTGGCT CCTCCTTGAG
ATCCCCAAGC ACATCATCAA CCACGCCCTT GCCGATGACG CGGGCGACGG TCACCCGAAG
ATGGCCTTCC TCGGCCTCCA TCTGGGCCGC GTCGAGCTGC TGTTCGCGCT GTGCGCCAGC
TACCTGGCGG TGCTCACGCT CAGCGGCCTC GCCAAGTACG CGGTCAATCG GGTCCGCGGG
CGCGTGAACG AGCGCCTCGT GCGCCGCCTC CGCCTCGCCA TCGTCCGGCG CGCGCGCGGC
GAGCGCTCCG CCGAACGGCG GGCCACGCTG GCCGCCGTCG CCGTCCAGGA GGTCGAGCCC
ATCGGCTACT TCGGCGGCAG CCTCGTGGTG GTGCCGCTCG TCCAGGGCGG CACGCTCGTG
ACCAGCATCG TCTTCCTTCT CCTGCAGAAC GCCGCCCTGG CCCTCGCGGC CCTGATCATG
CTGCCGGTCC AGCTGACGAT CCTGCCGCGG TTGCAGCGGC GGTTGAACGC GAAGGTCCGG
CAAAGGGTGC ATGCCACCCG TGAGCTGGGG GCGCTGCTCA CCGCTCCCGT GGTCGCGCGG
CCGGCCGGCG GCGAAGCGTG CGAGCCCTCC GGCCTGGGCC GGCAGATGCG CCAAGCCCGG
GGCCTTGAGC GGGTGCGCAT CGAAATTAAC GACCTGAAGG GTCGCCTCAA GGGCCTTTAC
AACTACACAG CGAACCTCAC CCCGTTCTTC TTCTTCTCGA TCGGCGGCTA CCTCGTCGTG
CAGGGGCGGC TCTCGCTCGG CGCGCTCGTC GCCGCCCTGG CCGCCTACAA GGAGATCGCC
CCGGCCATGC GCGAGTTGTT CGACTTCGCC CAGGACTGGT CCGACGCGCG CGCACGCTTC
GAGGAGGTCA CCAAGGCCCT CGGGCCGGCC GGGCAGGAGC AACGCGCGAC GGAGAGGCCG
GTGCGCGACC GGACCGTTCG AGCGGCCTGA
 
Protein sequence
MLTPPIIHEL IHWTLGLDHA HAHWWIDLVT VVVLVVAPAW TAWLAARSGL RWAAARRDRV 
RKGRAVPSSA ASTGAAGRPG SRETGAVPLE AYVVRATSRL QVRLVLLSVL TLPAAWLLLE
IPKHIINHAL ADDAGDGHPK MAFLGLHLGR VELLFALCAS YLAVLTLSGL AKYAVNRVRG
RVNERLVRRL RLAIVRRARG ERSAERRATL AAVAVQEVEP IGYFGGSLVV VPLVQGGTLV
TSIVFLLLQN AALALAALIM LPVQLTILPR LQRRLNAKVR QRVHATRELG ALLTAPVVAR
PAGGEACEPS GLGRQMRQAR GLERVRIEIN DLKGRLKGLY NYTANLTPFF FFSIGGYLVV
QGRLSLGALV AALAAYKEIA PAMRELFDFA QDWSDARARF EEVTKALGPA GQEQRATERP
VRDRTVRAA