Gene Mpop_2463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2463 
Symbol 
ID6313390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2680258 
End bp2681430 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content72% 
IMG OID642651192 
Productpolysaccharide export protein 
Protein accessionYP_001925160 
Protein GI188581715 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.118558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCA GTGCGGTTCT GGCGATCCTC GCGGCCTCCC TGGCCGTATC GGGATGCTCG 
CTCCTGCCGG CCGCGGGCCC GACCACCTCG GCGATCGAGA ACGGCGCCGA CGTCGCCACC
GCCGAAGGCC TGTTCGCCCG CTACGAGATC ATCGACGTCA CCCCCGCCAT CGTCGAGGCC
CTGCGCACCC GCCCCCTCGA CAGCCTCCTC GTCACCTTCG GCGACCATCG CCCCTCCGTC
GAGCCGGTGA TCGGCGTCGG CGACTCGGTG GCGGTGCAGG TGTGGGAGGC CGGCTCCGGC
GGCCTGTTCT CCGGCCCGCT CGTCGCCGAC CGGTTCTCCG CCGGCTCCAA GTCCGCCCTG
ATTCCCGAAC AGGTGGTCGG GCCCGACGGC GGCATCACCG TGCCCTATGC CGGCCGCATC
AAGGTCGTCG GCCGCCGTAC CCAGGACGTC CAGGCGCTGA TCGAGACCGA ACTCGCCGGC
AAGGCGATCC AGCCGCAGGT GCTCGTCTCC GTCACCAAGC CGGTCTCGCA ATCGGTCACG
GTCACCGGCG AGGCGGCGAC CGGCAAGCGC GTGCCGCTGT CGGGGCGCGG CGACCGGCTG
CTCGACGTCA TCGCCCAGGC CGGCGGCGTG CGCACGCCCG TGGCCGAGAC CTTCGTGCGG
CTCTCGCGCG GCAACCGCAC CGTCACCGTG CCGATGAGCA CCGTGGTCGC CAATCCGCGC
GAAAACATCT TCGTGCGCCC CGACGACACG CTGACGCTGG TGCGCGATCC GCAGACCTTC
CTGTCGGTGG GCGCGCTCGG CAGCACCACC GAGGTGCCGT TCTCGGCCGA GGGCCTGACG
CTGTCGCAGG CGCTCGCCCG CGCCGCGGGC CTGCGCGACT TCCAGGCCGA TCCGGCAGGC
GTGTTCGTGT TCCGCTACGA GCCGTCGGCG GTGGTGCGGC GGCTGCGGCC GAACTCGCCG
CTGCTCGCCT CGCCGCAGGT GCCGGTGGTG TACCGGGTGA ACCTGCGTGA CGCGCAGGGG
CTGTTCCTCA CCCAGAGCTT CCGGATGCGC AACCGCGACC TCGTCTACGT GTCGAGTTCG
CCGTTTGCGG AACTGGGCAA GGTGTTGGGC GTGTTCTCCA CGGTGACCGC TCCGGTCACC
GCGGGCGCCT CACTCTACAC CGTCACGCGA TAG
 
Protein sequence
MKRSAVLAIL AASLAVSGCS LLPAAGPTTS AIENGADVAT AEGLFARYEI IDVTPAIVEA 
LRTRPLDSLL VTFGDHRPSV EPVIGVGDSV AVQVWEAGSG GLFSGPLVAD RFSAGSKSAL
IPEQVVGPDG GITVPYAGRI KVVGRRTQDV QALIETELAG KAIQPQVLVS VTKPVSQSVT
VTGEAATGKR VPLSGRGDRL LDVIAQAGGV RTPVAETFVR LSRGNRTVTV PMSTVVANPR
ENIFVRPDDT LTLVRDPQTF LSVGALGSTT EVPFSAEGLT LSQALARAAG LRDFQADPAG
VFVFRYEPSA VVRRLRPNSP LLASPQVPVV YRVNLRDAQG LFLTQSFRMR NRDLVYVSSS
PFAELGKVLG VFSTVTAPVT AGASLYTVTR