| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2455 |
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| Symbol | |
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| ID | 6309356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 2671207 |
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| End bp | 2672895 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642651184 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_001925152 |
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| Protein GI | 188581707 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.521664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.561041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTCA CGACACTCGA CTCCCTGGCC GGGCGGCGCG GCGCCGACGT GCTGGTGGAG
GTGCTGCGCA GCCAGGGGGT GCGCTACGTC TTCGGCAATC CGGGCACGAC CGAGCTGCCC
CTGATCGACG CCCTGACGGA CGCACCCGAC ATCGCCTACG TCCTGGCGCT GCAGGAGGCG
AGCGCGGTCG CCATGGCCGA CGGCTATGCC CAGGCGGCGC GACGGCCCGG ATTTCTCAAC
CTGCACACCG CCGGCGGTCT CGGCCACGGC ATGGGCAACC TGCTCAACGC CCAGATCTCC
GGCACGCCGC TGGTGGTGAC GGCGGGCCAG CAGGATTCGC GGCACGTCCT CACCGATCCG
CTGCTGTTCG GCGACCTGAC GACGATCGCG GGCCCGACGG TGAAATGGGC GCGGGAGGTC
ACCCACGCCA ACCAGCTCTC GATCCTCCTG CGCCGCGCCT TCAACGACTG CATGGCCGCC
CCGTCCGGTC CGGTCTTCCT GTCCCTGCCC ATGGACGTGA TGGAGGCGAT GACCGACGCG
CCGCTCGGCG AGATCTCGAC CATCGACCAC CGCGCCGTGG CCGGATCCCT CGACCGGCTC
GCGGACCGGT TGGCCGCCTT CGCCCCCGGG CGGCTGGCCC TGATCGCCGG CGACGAGGTC
GATGCGAGCG ACGCGTCGGA GCAGGCGGTG CGGCTCGCCG ACATCCTGGC GGCACCGGTC
TACGGCGCCT CCTGGCCGGC GCACATCCCG TTCCCCACCG CCCATCCGCT CTGGATGGGC
AATCTGCCGA CCAAGGCGAG CGGCATCGCC GAGATCCTCG GCCAGTACGA CGCCGTGTTC
GCGCTCGGCG GCAAGTCCCT GATCACCGTG CTCTATACGG AGGGGTCGGC GGTGCCGCCC
GGCACCGAGG TGTTCCAGCT CTCGGCCGAT GCGCGCGACC TCGGGCGCAC CTATGCGACG
CATCTCTCGA CCGTCGGCAA TGTCGGGGCC TCCCTCGACG TACTGCTGCC GCTGCTGGAG
GCGCGGGTGG CGCCGCGGGC GGAGGCCTAT GCGCGTCGGC GCGAGGCGGC GGTGGTGGCC
TACGACGCCC GGCGCGCGGC TCTGGCGGCC AAGGTGGAAG CGGCCTTTGC CGATCCGGTG
ATCCATCCCC TCGTCGCCGC TTCGGAGATC GCCCGCGCCG TCGGCTCCGA CGTCGCCATC
GTCGATGAGG CGCCCGCGAC CCTCGGGCAT CTGCGCACGT TTCTGCACAG CACCTGGACG
CGGCAATATT CATCGATCCG CGGCGGCGTG CTGGGCTGGG GCATGCCGGC CTCGGTCGGC
TACTCCCTCG GGCTCGACCG GGCGCCGGTG GTCTGCATCG TCGGCGACGG CGCGGCGATG
TACTCGCCCC AGGCGCTGTG GACCGCCGCG CATGAGGGGC TGCCGGTGAC CTTCGTGGTG
ATTAACAACG CCGAGTACAA CATCCTGAAG CAGTTCATGA AATCGCAGAC GCACTACGCC
TCGGTGCGGG CGAACCGCTT CATCGCCATG GACCTGACCG AGCCGCGCAT CGATTTCCTG
GCGCTCGCCG CATCGATGGG CGTGCCGTCG CGGCGGATCG AGCGGGCCGG CGACATCGCC
GGGGCGGTCG AGGCGGGGAT CCGTTCGGGG CGGCCGAACC TCGTGGAAGT GGTGGTCAGC
GCGGCGTGA
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| Protein sequence | MTVTTLDSLA GRRGADVLVE VLRSQGVRYV FGNPGTTELP LIDALTDAPD IAYVLALQEA
SAVAMADGYA QAARRPGFLN LHTAGGLGHG MGNLLNAQIS GTPLVVTAGQ QDSRHVLTDP
LLFGDLTTIA GPTVKWAREV THANQLSILL RRAFNDCMAA PSGPVFLSLP MDVMEAMTDA
PLGEISTIDH RAVAGSLDRL ADRLAAFAPG RLALIAGDEV DASDASEQAV RLADILAAPV
YGASWPAHIP FPTAHPLWMG NLPTKASGIA EILGQYDAVF ALGGKSLITV LYTEGSAVPP
GTEVFQLSAD ARDLGRTYAT HLSTVGNVGA SLDVLLPLLE ARVAPRAEAY ARRREAAVVA
YDARRAALAA KVEAAFADPV IHPLVAASEI ARAVGSDVAI VDEAPATLGH LRTFLHSTWT
RQYSSIRGGV LGWGMPASVG YSLGLDRAPV VCIVGDGAAM YSPQALWTAA HEGLPVTFVV
INNAEYNILK QFMKSQTHYA SVRANRFIAM DLTEPRIDFL ALAASMGVPS RRIERAGDIA
GAVEAGIRSG RPNLVEVVVS AA
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