Gene Mpop_2449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2449 
Symbol 
ID6309350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2661076 
End bp2664390 
Gene Length3315 bp 
Protein Length1104 aa 
Translation table11 
GC content69% 
IMG OID642651178 
Productacriflavin resistance protein 
Protein accessionYP_001925146 
Protein GI188581701 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.302925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCTCT CCGAACCCTT CATCCGCCGC CCGGTCGCGA CGACGCTCCT GACCGTCGGC 
CTGATGCTCG CCGGCCTGTT CGCCTATGTG CGGCTGCCGG TGGCGCCGCT GCCGCAGGTC
GATTTTCCCG TCATTCTCGT CCAGGCGCAG ATGGCCGGCG CCTCGCCGGA GACCATGGCG
ACGACGGTGG CCGCGCCGCT GGAGCGGCGG CTCGGGGCGA TCGCCGACGT CAACGAGATG
ACCTCGACGA GTTCCACCGG CACCGTGCGG ATCGTCCTGC TGTTCGGCCT CAACCGCGAC
ATCGACGGCG CCGCCCGCGA TGTGCAGGCG GCGATCAACG CCGCCCGCGC CGACCTGCCG
ACGGCGCTGC GCACCAATCC GACCTACCGC AAGTTCAACC CGGCCGACTC GCCGATCCTC
ATCCTCGGCC TCACCTCCGA CACCCTGACG CCGGGCCAGC TCTACGATTC CGCCGCGACC
ATCGTGCAGC AGCGGATGAG TCAGGTCGAG GGTGTCGGCA ACGTCGATAT CGGCGGCTCG
TCGCTGCCGG CGGTGCGGGT GGAACTCGAT CCCACCGCGC TGTTCCACTA CGGCATCGGC
CTGGAGGGCA TCCGCGCGGG GCTCGCCTCG GCCAATGCCA ACTCGCCCAA GGGCGACATC
GTCGCGGGCG ACCGCCGCTA CCAGCTCTAC GCCAACGACC AGGGCCGGCA GGCCTCGGAC
TATCGCGACA TCGTCGTGGC CTACCGCAAC GGCGCCGCCG TGCGGCTGGC CGATGTCGGC
GAGGTGGTCG ACTCGGTCGA GGACAAGCGC AACCTCGGTC TCGTCGACGG CAAGCCGGGC
GTGATCCTGT TCATCTACAA GCAGCCGGGC TCTAACGTCG TCGAGACGGT GGAGCGGGTG
CGCGCGGCGA TCCCACAGGT GCAGGCGGCG TTGCCGGGCG ACATCGACCT CGCCATCTCC
GGCGACCGTT CCGCCACGAT CCGCGCCTCG CTGGCGAGCA CCGAGGAGAC GCTGATCATC
GCGGTGATCC TCGTCGTCTT CGTCACGTAC ATCTTCCTGC GCTCGTGGCG GGCGACGCTG
ATCCCGGCGG TGGCGGTGCC GATTTCGATC ATCGGCACCT TCGCCGCGAT GTGGCTGCTC
GATTACTCCC TCGACATCCT GTCGCTGATG GCGCTCATCA TCGCGACCGG CTTCGTCGTG
GACGACGCCA TCGTCGTCTT GGAGAACATC CAGCGCCACA TTGAGGCGGG CAAGCCGCGG
GTCGAGGCCG CCCTGCTCGG CGCCCGCGAG GTCGGCTTCA CCGTCGTCTC GATGAGCCTG
TCGCTCATCG CCGTGTTCCT GCCGATCCTG CTGATGGGCG GCATCGTCGG CCGCCTGTTC
CGGGAATTCG CGGTCACCCT GTCGATGGCG ATCCTCGTCT CGCTCGTGCT GTCGCTCACG
ACGACGCCGA TGATGTGCGC GCTGCTCCTC AAGCCGGAAG CGGAGATGCA TGCGGGCAAG
CGCCCCAACC TCCTCTTGCG GATGCTGGAG GGCGGCTTCG ACGCGCTGCT GCGGGGCTAC
GAGCGCAGCC TTGGCTTCGC GCTGCGCCAC CGCCGCCTGA CGGCGCTCAG CGTGTTCATC
GCGATCGGGC TGACGGTCTA CGGCTACATC ATCGTGCCGA AGGGCTTCTT CCCCGATCAG
GATACCGGCC AGCTCATGGG CGGCATCCAG GCCGACCAGC GCATCTCGTT CCAGTCGATG
AAGGACAAGC TGGAGCGGGC GAGCGCCATC GTGCAGGCGG ACCCCGCGGT GGAGAGTATC
GTCGGCTTCA CCGGCGGGCG CGGCACCAAC TCCGCCAACG TCTTCGTCGG GCTCAAGCCC
CTGGGCCAGC GCGATCCCAT CGAGAAGGTG ATGGCGCGGC TTCGTCCCAA GCTCGCCCAG
GTCGCGGGCG CGCGGCTGTT CCTGTTCCCG CGCCAGGACC TGAGGATGGG CGGGCGCCAG
AGCTTCGCCC AGTACCAGTA CACGCTCCAG GGCGACACCG CGGCCGAGCT CTATGCCGCG
TCGCCCAAGC TGCTGCAGGC GCTGCAGAAG CGCACCGACA TCTTCGCCGA CGTGACCTCC
GACCAGCAGG AGGGCGGCCT GGAAAGCCGC CTCGTGATCG ACCGGCCGAC CGCCTTCCGC
TACGGCATCA CGCCGGACCA GATCGACAAC ACCCTCTACG ACGCCTTCGG CCAGCGGCAG
GTCTCGACGA TCTACAACCC GCTCAACCAG TACCACGTGG TGATGGAGAT CGCGCCGCGT
TACCTGCAGA ACCCGGAAGT GCTGAAGACG ATCTACGTCT CGACCACCGG CGGACGGGCG
CGGGGCTCGG CCACCACCAA TGCGGTTGCC GGCACGGTGG AGGGGGGCGG CACGACGACC
GCCTCGCAGG CCTCGACCTC CGGCACCTCC ACCACCGACA CCGCCGCGAC CATCGCCGCC
GATTCCGCGC GCAACGCCGC CTCCAACGCC ATCGCCGCGA GCCGCGGCAG CGCCTCGTCG
AGCGCGCCGG TGTCGAGCGC CAAGGAGACG ATGGTGCCGC TCTCGGCCTT CGCGCATTTC
GAGACCGGCA ACGCCCCGGT CCAGGTGGCG CATCAGGGCC TGTTCGTCGC GACGACGATC
TCGTTCAACC TCGTGCCCGG CAAGAGCCTG GGCGAGGCCA CCGCCGTGAT CAACCAGACC
ATGCTCGACC TGCAATTGCC GCAGACGATC CACGGCGAGT TCGCGGGCGC GGCCAAGAGC
TATCAGGAAT CGTCCTCGCG CCAGCCGCTG CTGATCCTGG CGGCGCTGCT GGCCGTCTAC
GCCGTGCTCG GAATCCTCTA CGAGAGCTAC GTGCACCCGC TGACGATTCT CTCGACGCTG
CCCTCGGCCG GCATCGGCGC CATCGTCGCG CTGCTCTCCA CCGGCACCGA GTTCACCATC
ATCGCCCTGA TCGCGGTGTT CCTGCTGATC GGCATCGTGA AGAAGAACGC CATCCTGATG
ATCGACTTCG CCATCGATGC GGAACGCCGC CGCGGCCTGA CGCCGGCGGA GGCGATCCAC
GAGGCCTGCC TCCTGCGCTT CCGTCCGATC ATGATGACGA CGCTCGCCGC CCTGCTCGGT
GCGGCCCCGC TCATCATCGC CGGCGGCGAG GGCGCGGAGC TGCGCCGGCC GCTCGGGATC
GCGATCGTCG GTGGACTCAT CGTCAGCCAG ATCCTGACCC TCTACACGAC CCCGGTCGTC
TACCTGTATC TCGACCGTCT CCGGCTCTGG GTGAAGCTTC GCCGGGGCGG ACCCGCGACG
GTACCGGCCG AGTGA
 
Protein sequence
MNLSEPFIRR PVATTLLTVG LMLAGLFAYV RLPVAPLPQV DFPVILVQAQ MAGASPETMA 
TTVAAPLERR LGAIADVNEM TSTSSTGTVR IVLLFGLNRD IDGAARDVQA AINAARADLP
TALRTNPTYR KFNPADSPIL ILGLTSDTLT PGQLYDSAAT IVQQRMSQVE GVGNVDIGGS
SLPAVRVELD PTALFHYGIG LEGIRAGLAS ANANSPKGDI VAGDRRYQLY ANDQGRQASD
YRDIVVAYRN GAAVRLADVG EVVDSVEDKR NLGLVDGKPG VILFIYKQPG SNVVETVERV
RAAIPQVQAA LPGDIDLAIS GDRSATIRAS LASTEETLII AVILVVFVTY IFLRSWRATL
IPAVAVPISI IGTFAAMWLL DYSLDILSLM ALIIATGFVV DDAIVVLENI QRHIEAGKPR
VEAALLGARE VGFTVVSMSL SLIAVFLPIL LMGGIVGRLF REFAVTLSMA ILVSLVLSLT
TTPMMCALLL KPEAEMHAGK RPNLLLRMLE GGFDALLRGY ERSLGFALRH RRLTALSVFI
AIGLTVYGYI IVPKGFFPDQ DTGQLMGGIQ ADQRISFQSM KDKLERASAI VQADPAVESI
VGFTGGRGTN SANVFVGLKP LGQRDPIEKV MARLRPKLAQ VAGARLFLFP RQDLRMGGRQ
SFAQYQYTLQ GDTAAELYAA SPKLLQALQK RTDIFADVTS DQQEGGLESR LVIDRPTAFR
YGITPDQIDN TLYDAFGQRQ VSTIYNPLNQ YHVVMEIAPR YLQNPEVLKT IYVSTTGGRA
RGSATTNAVA GTVEGGGTTT ASQASTSGTS TTDTAATIAA DSARNAASNA IAASRGSASS
SAPVSSAKET MVPLSAFAHF ETGNAPVQVA HQGLFVATTI SFNLVPGKSL GEATAVINQT
MLDLQLPQTI HGEFAGAAKS YQESSSRQPL LILAALLAVY AVLGILYESY VHPLTILSTL
PSAGIGAIVA LLSTGTEFTI IALIAVFLLI GIVKKNAILM IDFAIDAERR RGLTPAEAIH
EACLLRFRPI MMTTLAALLG AAPLIIAGGE GAELRRPLGI AIVGGLIVSQ ILTLYTTPVV
YLYLDRLRLW VKLRRGGPAT VPAE