Gene Mpop_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2448 
Symbol 
ID6309349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2657942 
End bp2661079 
Gene Length3138 bp 
Protein Length1045 aa 
Translation table11 
GC content68% 
IMG OID642651177 
Productacriflavin resistance protein 
Protein accessionYP_001925145 
Protein GI188581700 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGT CCCGCCTCTT CATCCTGCGA CCGGTCGCCA CGACGCTGTC GATGCTGGCG 
ATCCTGATCG TCGGCGCCGT GTCCTACCTG AACCTGCCGG TCTCGGCCCT GCCCGCCGTC
GATTACCCGA CGATCCAGGT GCAGACCTTC TATCCCGGCG CCAGCCCGGA GGTGATGACG
TCGGCCGTGA CCGCGCCGCT GGAGCGGCAG TTCGGCCAGA TGGCCAACCT CAACCAGATG
TCCTCGCAGA GTTCGGCGGG GGCCTCGGTC ATCACCCTTC AGTTCAACCT CGACATCCCC
CTCGATATCG CCGAGCAATC GGTTCAGGCG GCGATCAACG CGGCCGGCAA CCTGCTGCCG
ACCGACCTGC CGGCGCCGCC GGTCTACGCC AAGGTGAATC CGGCCGACGC GCCGGTGCTG
ACGCTGGCAC TGACCTCCGC GACGATGCCG CTGACGCAGG TTCGTGACCT CGCCGAGACC
CGCCTCGCCC AGAAGATCAG CCAGATCGCC GGCGTCGGCC TCGTCAGCAT GGGCGGCGGG
CAGCGCCCGG CGGTGCGGGT GCGCTTCAAT TCCCTGGCGA TGGCGGCCTA CGGCCTCAAC
ATCGACGACC TGCGCACGAC GATCGCCAAT CTCAACGTCA ACACGCCTAA GGGCAATATC
GACGGCCCGA CCCAGTCCTA CGCCATCAAC GCCAACGATC AGGTCCGCGA CCCGGCGGTC
TACGCCAGTG CGATCATCGC CTATCGCAAC GGCGCCCCGG TCCGCCTGAC CGACGTGGCC
GAAGTGGTGG ACGGGGCTGA GAACACCCGT CTCGGCGCCT GGGCCGACCG CACGCCCGCG
GTGATCCTCA ACATCCAGCG CCAGCCCGGC GCCAACGTCA TCGACACGGT CGACCGCATC
AAGCGGCTGC TGCCGCAGCT CGAAGCGACC ATGCCGGCCT CGGTCTCGGT GGCGACGCTC
ACCGACCGCA CGACGACGAT CCGCGCGTCC GTCCACGACG TGCAGTTCGA ACTGATGCTC
GCCATCGCGC TGGTCGTGAT GGTGATCTTC CTGTTCCTGC GCAGTTTCTC CGCCACGCTG
ATCCCGAGCC TGTCGGTGCC GCTCTCGCTG ATCGGTGCGC TCGCGGCGAT GGACGCCTGG
GGCTTCTCCC TCGACAACCT CTCGCTGATG GCGCTGACCA TCGCCACCGG CTTCGTCGTG
GACGACGCCA TCGTCGTCAT CGAGAACATC GCCCGCCACG TCGAGGAGGG CGACAGCCCG
TTCGAGGCGG CGCTGAAGGG CAGCCGCGAG ATCGGCTTCA CCATCATCTC GCTCACCGTC
TCGCTGATCG CGGTGCTGAT CCCGCTCCTG TTCATGGGCG ACGTGGTCGG CCGCCTGTTC
CGCGAATTCG CGATCACGCT GGCGGCGACC ATCGTCATCT CGGCGGTGGT CTCGCTGACC
CTCGTGCCGA TGCTCTGCGC GCGGCTCCTG AAGCCCGTCG CGCACGGCGC CGACACGCCG
GCCGCCCGCC GCGAGGGGCC GATCGCGCGC TTCGGCCGGC GGCTCAACGA CGGCGTCATC
GCCCTCTACG GCCGGGCGCT TCGCGTCGTT CTGGCCAATC AGGGGCTGAC GCTGATCGTC
ACGCTCGGCA CGGTGGCGCT CACCGCCTAC CTGTTCGTGG TGATCCCGAA AGGCTTCTTT
CCCGTGCAGG ACACGGGCGT GATCCAGGGC ATCTCACAGG CCGACCAGAG CGTGTCCTAC
GAGGCCATGG CGGAGCGCCA GCAGGCGCTG GCCGACAGGG TGCTGAAGGA CCCGGACGTG
GCGAGCCTGT CCTCGTTCAT CGGCGTCGAT GGCCAGAACG TCACCCTCAA TTCCGGCCGC
TTCCTCATCA ACCTGAAGCC CCGCGAGGCG CGCCAGTCGG ATGCCAGCGC GATCATCCGC
CGCCTCAACG CGGCGACGAG CACGGTGCCC GGCGTGCGGC TCTACATGCA GCCGGTGCAG
GATCTGACGA TCGACACCGC GGTCTCGGCG ACGCAGTACC AAGTCATCCT CGAAAACCCG
AACCTCGGTG ACTTCGAGAC CTGGGTGCCG CGCTACGTCG AGGCGCTGCG CCGTTCGCCG
CTGCTGGCCG ACGTCACCAG CGACTACCAG GGCAACGGGC TCGCTGCCTA CGTCACCATC
GATCGCGCCA CGGCGGGCCG CTACGGCATC ACGCCGGCCA CGATCGACAA CGTGCTTTAC
GACGCCTTCG GCCAGCGCAT CGTCTCGACC ATCTTCACCC AGTCGAACCA GTATCGGGTG
ATTTTGGAGG CGAACCCGAA GCTGCACACC ACGCTCGCCT CCCTCGACAA CCTCTACCTG
CCGTCCTCCA CCGCGCCGTC GGGGCAGGTG CCGCTCTCGG CGGTGGCGAA GGTGGAGGAG
CGCCGCGCGC CCCTGCTGAT CGGTCATCTC GGCCAGTTCC CGGCCACCAC CGTCTCGTTC
AACCTCGCCC CGGGCGTGGC CCTCGGGCAG GCGGTGGACG CGTTGGAGAC CGCGCGGAAG
GAGATCAGCC TGCCGGCGAG CTTCAATGTG GTGCCGCAGG GCTCGGTCTT CGCCTTCGAG
TCGGCGCTCT CGAACGAACT GTTCCTCGTC TGCGCCGCGA TCGTCACCGT CTACATCGTG
CTCGGCGTGC TCTACGAGAG CTTCATCCAC CCGATCACCA TCCTCTCGAC CCTGCCCTCG
GCCGGCATCG GCGCGCTGCT CGGGCTGATG TGGTTCGGGC TCTCGCTCGA CATCATCGCG
ATCATCGGCA TCGTCCTGCT GATCGGCATC GTGAAGAAGA ACGCGATCAT GATGATCGAC
TTCGCGCTCC AGGCCGAGCG CGAGGAGGGC AAGGCCCCGC GCGACGCGAT CTACGAGGCC
TGCCTGCTGC GCTTCCGCCC GATCCTGATG ACGACGCTGG CCGCCCTGTT CGCGGCGGTG
CCGATGATCA TCGGCTCGGG CGTCGGCTCG GAGCTGCGCC AGCCGCTCGG CATCGTCATC
GCCGGCGGCC TCATCGTCAG CCAGGTGCTG ACGCTGTTCA CGACGCCGGT GATCTATCTC
GCCTTCGACC GGCTGGAGCG GCGCATCACC CGGCGGCGGG AGCGGGACGG GCTGGCTCCG
GACGGGGCGG TGCCTTGA
 
Protein sequence
MNPSRLFILR PVATTLSMLA ILIVGAVSYL NLPVSALPAV DYPTIQVQTF YPGASPEVMT 
SAVTAPLERQ FGQMANLNQM SSQSSAGASV ITLQFNLDIP LDIAEQSVQA AINAAGNLLP
TDLPAPPVYA KVNPADAPVL TLALTSATMP LTQVRDLAET RLAQKISQIA GVGLVSMGGG
QRPAVRVRFN SLAMAAYGLN IDDLRTTIAN LNVNTPKGNI DGPTQSYAIN ANDQVRDPAV
YASAIIAYRN GAPVRLTDVA EVVDGAENTR LGAWADRTPA VILNIQRQPG ANVIDTVDRI
KRLLPQLEAT MPASVSVATL TDRTTTIRAS VHDVQFELML AIALVVMVIF LFLRSFSATL
IPSLSVPLSL IGALAAMDAW GFSLDNLSLM ALTIATGFVV DDAIVVIENI ARHVEEGDSP
FEAALKGSRE IGFTIISLTV SLIAVLIPLL FMGDVVGRLF REFAITLAAT IVISAVVSLT
LVPMLCARLL KPVAHGADTP AARREGPIAR FGRRLNDGVI ALYGRALRVV LANQGLTLIV
TLGTVALTAY LFVVIPKGFF PVQDTGVIQG ISQADQSVSY EAMAERQQAL ADRVLKDPDV
ASLSSFIGVD GQNVTLNSGR FLINLKPREA RQSDASAIIR RLNAATSTVP GVRLYMQPVQ
DLTIDTAVSA TQYQVILENP NLGDFETWVP RYVEALRRSP LLADVTSDYQ GNGLAAYVTI
DRATAGRYGI TPATIDNVLY DAFGQRIVST IFTQSNQYRV ILEANPKLHT TLASLDNLYL
PSSTAPSGQV PLSAVAKVEE RRAPLLIGHL GQFPATTVSF NLAPGVALGQ AVDALETARK
EISLPASFNV VPQGSVFAFE SALSNELFLV CAAIVTVYIV LGVLYESFIH PITILSTLPS
AGIGALLGLM WFGLSLDIIA IIGIVLLIGI VKKNAIMMID FALQAEREEG KAPRDAIYEA
CLLRFRPILM TTLAALFAAV PMIIGSGVGS ELRQPLGIVI AGGLIVSQVL TLFTTPVIYL
AFDRLERRIT RRRERDGLAP DGAVP