Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_2448 |
Symbol | |
ID | 6309349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 2657942 |
End bp | 2661079 |
Gene Length | 3138 bp |
Protein Length | 1045 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642651177 |
Product | acriflavin resistance protein |
Protein accession | YP_001925145 |
Protein GI | 188581700 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGT CCCGCCTCTT CATCCTGCGA CCGGTCGCCA CGACGCTGTC GATGCTGGCG ATCCTGATCG TCGGCGCCGT GTCCTACCTG AACCTGCCGG TCTCGGCCCT GCCCGCCGTC GATTACCCGA CGATCCAGGT GCAGACCTTC TATCCCGGCG CCAGCCCGGA GGTGATGACG TCGGCCGTGA CCGCGCCGCT GGAGCGGCAG TTCGGCCAGA TGGCCAACCT CAACCAGATG TCCTCGCAGA GTTCGGCGGG GGCCTCGGTC ATCACCCTTC AGTTCAACCT CGACATCCCC CTCGATATCG CCGAGCAATC GGTTCAGGCG GCGATCAACG CGGCCGGCAA CCTGCTGCCG ACCGACCTGC CGGCGCCGCC GGTCTACGCC AAGGTGAATC CGGCCGACGC GCCGGTGCTG ACGCTGGCAC TGACCTCCGC GACGATGCCG CTGACGCAGG TTCGTGACCT CGCCGAGACC CGCCTCGCCC AGAAGATCAG CCAGATCGCC GGCGTCGGCC TCGTCAGCAT GGGCGGCGGG CAGCGCCCGG CGGTGCGGGT GCGCTTCAAT TCCCTGGCGA TGGCGGCCTA CGGCCTCAAC ATCGACGACC TGCGCACGAC GATCGCCAAT CTCAACGTCA ACACGCCTAA GGGCAATATC GACGGCCCGA CCCAGTCCTA CGCCATCAAC GCCAACGATC AGGTCCGCGA CCCGGCGGTC TACGCCAGTG CGATCATCGC CTATCGCAAC GGCGCCCCGG TCCGCCTGAC CGACGTGGCC GAAGTGGTGG ACGGGGCTGA GAACACCCGT CTCGGCGCCT GGGCCGACCG CACGCCCGCG GTGATCCTCA ACATCCAGCG CCAGCCCGGC GCCAACGTCA TCGACACGGT CGACCGCATC AAGCGGCTGC TGCCGCAGCT CGAAGCGACC ATGCCGGCCT CGGTCTCGGT GGCGACGCTC ACCGACCGCA CGACGACGAT CCGCGCGTCC GTCCACGACG TGCAGTTCGA ACTGATGCTC GCCATCGCGC TGGTCGTGAT GGTGATCTTC CTGTTCCTGC GCAGTTTCTC CGCCACGCTG ATCCCGAGCC TGTCGGTGCC GCTCTCGCTG ATCGGTGCGC TCGCGGCGAT GGACGCCTGG GGCTTCTCCC TCGACAACCT CTCGCTGATG GCGCTGACCA TCGCCACCGG CTTCGTCGTG GACGACGCCA TCGTCGTCAT CGAGAACATC GCCCGCCACG TCGAGGAGGG CGACAGCCCG TTCGAGGCGG CGCTGAAGGG CAGCCGCGAG ATCGGCTTCA CCATCATCTC GCTCACCGTC TCGCTGATCG CGGTGCTGAT CCCGCTCCTG TTCATGGGCG ACGTGGTCGG CCGCCTGTTC CGCGAATTCG CGATCACGCT GGCGGCGACC ATCGTCATCT CGGCGGTGGT CTCGCTGACC CTCGTGCCGA TGCTCTGCGC GCGGCTCCTG AAGCCCGTCG CGCACGGCGC CGACACGCCG GCCGCCCGCC GCGAGGGGCC GATCGCGCGC TTCGGCCGGC GGCTCAACGA CGGCGTCATC GCCCTCTACG GCCGGGCGCT TCGCGTCGTT CTGGCCAATC AGGGGCTGAC GCTGATCGTC ACGCTCGGCA CGGTGGCGCT CACCGCCTAC CTGTTCGTGG TGATCCCGAA AGGCTTCTTT CCCGTGCAGG ACACGGGCGT GATCCAGGGC ATCTCACAGG CCGACCAGAG CGTGTCCTAC GAGGCCATGG CGGAGCGCCA GCAGGCGCTG GCCGACAGGG TGCTGAAGGA CCCGGACGTG GCGAGCCTGT CCTCGTTCAT CGGCGTCGAT GGCCAGAACG TCACCCTCAA TTCCGGCCGC TTCCTCATCA ACCTGAAGCC CCGCGAGGCG CGCCAGTCGG ATGCCAGCGC GATCATCCGC CGCCTCAACG CGGCGACGAG CACGGTGCCC GGCGTGCGGC TCTACATGCA GCCGGTGCAG GATCTGACGA TCGACACCGC GGTCTCGGCG ACGCAGTACC AAGTCATCCT CGAAAACCCG AACCTCGGTG ACTTCGAGAC CTGGGTGCCG CGCTACGTCG AGGCGCTGCG CCGTTCGCCG CTGCTGGCCG ACGTCACCAG CGACTACCAG GGCAACGGGC TCGCTGCCTA CGTCACCATC GATCGCGCCA CGGCGGGCCG CTACGGCATC ACGCCGGCCA CGATCGACAA CGTGCTTTAC GACGCCTTCG GCCAGCGCAT CGTCTCGACC ATCTTCACCC AGTCGAACCA GTATCGGGTG ATTTTGGAGG CGAACCCGAA GCTGCACACC ACGCTCGCCT CCCTCGACAA CCTCTACCTG CCGTCCTCCA CCGCGCCGTC GGGGCAGGTG CCGCTCTCGG CGGTGGCGAA GGTGGAGGAG CGCCGCGCGC CCCTGCTGAT CGGTCATCTC GGCCAGTTCC CGGCCACCAC CGTCTCGTTC AACCTCGCCC CGGGCGTGGC CCTCGGGCAG GCGGTGGACG CGTTGGAGAC CGCGCGGAAG GAGATCAGCC TGCCGGCGAG CTTCAATGTG GTGCCGCAGG GCTCGGTCTT CGCCTTCGAG TCGGCGCTCT CGAACGAACT GTTCCTCGTC TGCGCCGCGA TCGTCACCGT CTACATCGTG CTCGGCGTGC TCTACGAGAG CTTCATCCAC CCGATCACCA TCCTCTCGAC CCTGCCCTCG GCCGGCATCG GCGCGCTGCT CGGGCTGATG TGGTTCGGGC TCTCGCTCGA CATCATCGCG ATCATCGGCA TCGTCCTGCT GATCGGCATC GTGAAGAAGA ACGCGATCAT GATGATCGAC TTCGCGCTCC AGGCCGAGCG CGAGGAGGGC AAGGCCCCGC GCGACGCGAT CTACGAGGCC TGCCTGCTGC GCTTCCGCCC GATCCTGATG ACGACGCTGG CCGCCCTGTT CGCGGCGGTG CCGATGATCA TCGGCTCGGG CGTCGGCTCG GAGCTGCGCC AGCCGCTCGG CATCGTCATC GCCGGCGGCC TCATCGTCAG CCAGGTGCTG ACGCTGTTCA CGACGCCGGT GATCTATCTC GCCTTCGACC GGCTGGAGCG GCGCATCACC CGGCGGCGGG AGCGGGACGG GCTGGCTCCG GACGGGGCGG TGCCTTGA
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Protein sequence | MNPSRLFILR PVATTLSMLA ILIVGAVSYL NLPVSALPAV DYPTIQVQTF YPGASPEVMT SAVTAPLERQ FGQMANLNQM SSQSSAGASV ITLQFNLDIP LDIAEQSVQA AINAAGNLLP TDLPAPPVYA KVNPADAPVL TLALTSATMP LTQVRDLAET RLAQKISQIA GVGLVSMGGG QRPAVRVRFN SLAMAAYGLN IDDLRTTIAN LNVNTPKGNI DGPTQSYAIN ANDQVRDPAV YASAIIAYRN GAPVRLTDVA EVVDGAENTR LGAWADRTPA VILNIQRQPG ANVIDTVDRI KRLLPQLEAT MPASVSVATL TDRTTTIRAS VHDVQFELML AIALVVMVIF LFLRSFSATL IPSLSVPLSL IGALAAMDAW GFSLDNLSLM ALTIATGFVV DDAIVVIENI ARHVEEGDSP FEAALKGSRE IGFTIISLTV SLIAVLIPLL FMGDVVGRLF REFAITLAAT IVISAVVSLT LVPMLCARLL KPVAHGADTP AARREGPIAR FGRRLNDGVI ALYGRALRVV LANQGLTLIV TLGTVALTAY LFVVIPKGFF PVQDTGVIQG ISQADQSVSY EAMAERQQAL ADRVLKDPDV ASLSSFIGVD GQNVTLNSGR FLINLKPREA RQSDASAIIR RLNAATSTVP GVRLYMQPVQ DLTIDTAVSA TQYQVILENP NLGDFETWVP RYVEALRRSP LLADVTSDYQ GNGLAAYVTI DRATAGRYGI TPATIDNVLY DAFGQRIVST IFTQSNQYRV ILEANPKLHT TLASLDNLYL PSSTAPSGQV PLSAVAKVEE RRAPLLIGHL GQFPATTVSF NLAPGVALGQ AVDALETARK EISLPASFNV VPQGSVFAFE SALSNELFLV CAAIVTVYIV LGVLYESFIH PITILSTLPS AGIGALLGLM WFGLSLDIIA IIGIVLLIGI VKKNAIMMID FALQAEREEG KAPRDAIYEA CLLRFRPILM TTLAALFAAV PMIIGSGVGS ELRQPLGIVI AGGLIVSQVL TLFTTPVIYL AFDRLERRIT RRRERDGLAP DGAVP
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