Gene Mpop_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2196 
SymbolpanC 
ID6313977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2352619 
End bp2353476 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID642650921 
Productpantoate--beta-alanine ligase 
Protein accessionYP_001924893 
Protein GI188581448 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.941779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.927137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA CCACCCTCCG CTTCGACACC CTTGAGGCCC TGCGCGCGCG GGTCGACGCG 
TGGCGTCAGG GCGGCGACCG GATCGTGCTG GTACCGACCA TGGGGGCGCT GCATGCGGGC
CACCTCGCTC TGGTGGCGCA TGCCAAGGCG ATCGGCCGGC GGGCGGTCGT CAGCATCTTC
GTGAACCCGA CCCAGTTCGG CCCGAACGAG GATTTTGCGC GCTACCCCCG CGATACGGAA
ACCGACCTCG GCCTGCTCTC GCGGGCTGGC GCCGATGCGG CGTGGCTCCC CTCCGTCGAG
ACCATGTACC CGTCAGGTTT CTCGACGCGC ATCGAGCCCG GCCCGGCGGC GGAGGGTCTG
TGCGGCGCGG TCCGGCCCGG CCATTTCTCC GGCGTCGCCA CCGTGGTGAC CAAGCTCATC
AACCAAGTCC GACCCGATGT GGCCCTGTTC GGCGAGAAGG ACTTTCAGCA GTTGCAGGTG
ATCCGCTCGG TCGTCCGCGA CCTCGATCTG GCGGTGACCA TCGAGGGAGT GCCGACGCTC
CGCGAGACGG ACGGCCTCGC CCTGTCCTCG CGCAACCGCT ACCTCGACCC GCGCGAGCGC
GCGATCGCCC CGCGCCTGCA CGCGGTCCTC GCCGACATGG CCGGGCGCCT CGCCCACGGC
GCCGAGGCCG CCCCGCTCGT GGCCGAGGGT ATCGCCGTGC TGGAGGCGGC GGGGTTCGGG
CCGGTGCAGT ATCTGGAGGT GCGCGACGCG CACACGCTCG CGCCCGTGGC CCGGGTCGAG
CGCGAGGCGC GGGTGCTGGT GGCGGCCTAT CTCGGCCGGA CACGGCTCAT CGACAACGTG
GCGGTGGTGC CGGTCTGA
 
Protein sequence
MSDTTLRFDT LEALRARVDA WRQGGDRIVL VPTMGALHAG HLALVAHAKA IGRRAVVSIF 
VNPTQFGPNE DFARYPRDTE TDLGLLSRAG ADAAWLPSVE TMYPSGFSTR IEPGPAAEGL
CGAVRPGHFS GVATVVTKLI NQVRPDVALF GEKDFQQLQV IRSVVRDLDL AVTIEGVPTL
RETDGLALSS RNRYLDPRER AIAPRLHAVL ADMAGRLAHG AEAAPLVAEG IAVLEAAGFG
PVQYLEVRDA HTLAPVARVE REARVLVAAY LGRTRLIDNV AVVPV